RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 ASB2Q96Q27 587 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 RTP3Q9BQQ7 232 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 ACBD6Q9BR61 282 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 IQCGQ9H095 443 aaKnown RBP6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 ADAM7Q9H2U9 754 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 CD207Q9UJ71 328 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 MAFFQ9ULX9 164 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 L1RE1Q9UN81 338 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 COQ4Q9Y3A0 265 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 ATG2AQ2TAZ0 1938 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 CCDC195A0A1B0GUA6 201 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 PMM2O15305 246 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 MBTPS2O43462 519 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 LRRN2O75325 713 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 TACC1O75410 805 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 ASS1P00966 412 aaKnown RBP6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 HLA-DRAP01903 254 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 CCNYL3P0C7X3 344 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 CCDC192P0DO97 292 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 GNL1P36915 607 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 CLK1P49759 484 aaKnown RBP6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 CDKN1CP49918 316 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 ZNF132P52740 706 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 ARPP19P56211 112 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 ITIH3Q06033 890 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 SMARCB1Q12824 385 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 ORC1Q13415 861 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 BRD3Q15059 726 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 CLUL1Q15846 466 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 LONRF1Q17RB8 773 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 SKOR2Q2VWA4 1001 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 CCDC40Q4G0X9 1142 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 CBWD6Q4V339 395 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 ZNF667Q5HYK9 610 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 CBWD3Q5JTY5 395 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 CBWD5Q5RIA9 395 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 TCERG1LQ5VWI1 586 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 ELMSAN1Q6PJG2 1045 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 BLOC1S3Q6QNY0 202 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 CYP26C1Q6V0L0 522 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 GPR149Q86SP6 731 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 TRIM74Q86UV6 250 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 TRIM73Q86UV7 250 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 LRRTM3Q86VH5 581 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 TRIM59Q8IWR1 403 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 CHCHD4Q8N4Q1 142 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 C12orf76Q8N812 135 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 CMASQ8NFW8 434 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 TAS1R2Q8TE23 839 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 KBTBD7Q8WVZ9 684 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 FAXDC2Q96IV6 333 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 TMEM209Q96SK2 561 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 MMS19Q96T76 1030 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 DNAJC7Q99615 494 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 SLX1AQ9BQ83 275 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 RHOBTB2Q9BYZ6 727 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 ZCWPW1Q9H0M4 648 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 MMRN2Q9H8L6 949 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 MAN1C1Q9NR34 630 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 DZANK1Q9NVP4 752 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 ANO10Q9NW15 660 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 IRAK4Q9NWZ3 460 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 RAB20Q9NX57 234 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 DDX43Q9NXZ2 648 aaKnown RBP6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 NXF1Q9UBU9 619 aaKnown RBP6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 AFF4Q9UHB7 1163 aaKnown RBP6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 FBXW11Q9UKB1 542 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 TMCC3Q9ULS5 477 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 EFR3BQ9Y2G0 817 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 SCN1AP35498 2009 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 VWA8A3KMH1 1905 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 UNC80Q8N2C7 3258 aa6.67□□□□□ -1.34
ATPAF1-209ENST00000529214 DYTNA2CJ06 578 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 P4HA2O15460 535 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 TSPAN6O43657 245 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 RFPL2O75678 378 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 SEC24AO95486 1093 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 VNN2O95498 520 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 OR4Q2P0C623 313 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 CPB1P15086 417 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 WARSP23381 471 aaKnown RBP6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 RRM1P23921 792 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 LMO2P25791 158 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 HOXA9P31269 272 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 STIP1P31948 543 aaKnown RBP6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 ELF1P32519 619 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 PIK3CAP42336 1068 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 FMO5P49326 533 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 MXI1P50539 228 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 KCNQ1P51787 676 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 CDH8P55286 799 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 TNNC1P63316 161 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 MYL7Q01449 175 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 ADCY1Q08828 1119 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 IFRD2Q12894 506 aaPredicted RBP6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 SMAD4Q13485 552 aaKnown RBP6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 SMAD2Q15796 467 aaKnown RBP6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 TPD52L1Q16890 204 aaPredicted RBP6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 ZNF699Q32M78 642 aa6.66□□□□□ -1.34
ATPAF1-209ENST00000529214 DCAF17Q5H9S7 520 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms