RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 RLFQ13129 1914 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 IRF6O14896 467 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 MCF2LO15068 1137 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 KCNN4O15554 427 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 LSM8O95777 96 aaKnown RBP7.79□□□□□ -1.16
C11orf54-207ENST00000528288 MT-ND3P03897 115 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 STAG3L1P0CL83 205 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 PDGFRAP16234 1089 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 PTPN11Q06124 597 aaPredicted RBP7.79□□□□□ -1.16
C11orf54-207ENST00000528288 PTK7Q13308 1070 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 DPYSL3Q14195 570 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 ATP11CQ8NB49 1132 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 DCAKDQ8WVC6 231 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 RXFP2Q8WXD0 754 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 GPR20Q99678 358 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 DDX56Q9NY93 547 aaKnown RBP7.79□□□□□ -1.16
C11orf54-207ENST00000528288 ZFP69BQ9UJL9 534 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 SHOC2Q9UQ13 582 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 C15orf41Q9Y2V0 281 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 CYB561D2O14569 222 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 LPXNO60711 386 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 RNF8O76064 485 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 TRUB2O95900 331 aaKnown RBP7.79□□□□□ -1.16
C11orf54-207ENST00000528288 ICAM3P32942 547 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 GMPRP36959 345 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 PHKA2P46019 1235 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 MKRN3Q13064 507 aaKnown RBP7.79□□□□□ -1.16
C11orf54-207ENST00000528288 EFHC2Q5JST6 749 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 TLDC1Q6P9B6 456 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 METTL7BQ6UX53 244 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 CDHR3Q6ZTQ4 885 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 RELL1Q8IUW5 271 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 SCUBE3Q8IX30 993 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 PDIK1LQ8N165 341 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 CCDC110Q8TBZ0 833 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 STARD13Q9Y3M8 1113 aa7.79□□□□□ -1.16
C11orf54-207ENST00000528288 TCRBV9S1A1TA0A576 114 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 PPEF2O14830 753 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 PRPF4O43172 522 aaKnown RBP eCLIP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 HMGCRP04035 888 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 APRTP07741 180 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 GRIA1P42261 906 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 NDST1P52848 882 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 LRRC38Q5VT99 294 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 IER5Q5VY09 327 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 LBX2Q6XYB7 198 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 BBS12Q6ZW61 710 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 UNC5BQ8IZJ1 945 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 GBP7Q8N8V2 638 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 FAM13CQ8NE31 585 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 CCHCR1Q8TD31 782 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 SLC7A6OSQ96CW6 309 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 C12orf42Q96LP6 360 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 CEP41Q9BYV8 373 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 YY1AP1Q9H869 796 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 ARL8BQ9NVJ2 186 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 HEY2Q9UBP5 337 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 AKT3Q9Y243 479 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 FAM237BA0A1B0GVD1 139 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 KRT7P08729 469 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 ZNF286BP0CG31 522 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 PAX7P23759 505 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 RBL1P28749 1068 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 EFNA5P52803 228 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 CRADDP78560 199 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 ZBTB16Q05516 673 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 KRT81Q14533 505 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 GLRA4Q5JXX5 417 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 DRICH1Q6PGQ1 229 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 FAM183BPQ6ZVS7 135 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 C7orf31Q8N865 590 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 DNERQ8NFT8 737 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 MANSC1Q9H8J5 431 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 NOP53Q9NZM5 478 aaKnown RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 SMG5Q9UPR3 1016 aaKnown RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 MFHAS1Q9Y4C4 1052 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 ACTL7BQ9Y614 415 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 MAD1L1Q9Y6D9 718 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 IKBKGQ9Y6K9 419 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 POLR2AP24928 1970 aaKnown RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 SYNJ2BP-COX16A0A087WUM0 186 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 TXNP10599 105 aaKnown RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 CCNB1P14635 433 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 SERPINB3P29508 390 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 ALDH3A1P30838 453 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 ROR1Q01973 937 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 CCDC142Q17RM4 750 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 BSPRYQ5W0U4 402 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 ACOT1Q86TX2 421 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 RIBC1Q8N443 379 aaPredicted RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 CHST13Q8NET6 341 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 CLEC4CQ8WTT0 213 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 NDRG1Q92597 394 aaKnown RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 TMEM176AQ96HP8 235 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 HPDLQ96IR7 371 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 TXLNGQ9NUQ3 528 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 GEMIN8Q9NWZ8 242 aaKnown RBP7.78□□□□□ -1.16
C11orf54-207ENST00000528288 IL1RAPL1Q9NZN1 696 aa7.78□□□□□ -1.16
C11orf54-207ENST00000528288 COX16Q9P0S2 106 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms