RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 VASH1Q7L8A9 365 aaPredicted RBP11.7□□□□□ -0.54
CCDC84-205ENST00000528088 LRRTM3Q86VH5 581 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 UNC93AQ86WB7 457 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 ARHGEF19Q8IW93 802 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 TCEAL8Q8IYN2 117 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 RNF214Q8ND24 703 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 NECTIN4Q96NY8 510 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 LSM14BQ9BX40 385 aaKnown RBP11.7□□□□□ -0.54
CCDC84-205ENST00000528088 CISHQ9NSE2 258 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 FAM49BQ9NUQ9 324 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 TMLHEQ9NVH6 421 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 HMGXB4Q9UGU5 601 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 YIPF1Q9Y548 306 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 PCDHB4Q9Y5E5 795 aa11.7□□□□□ -0.54
CCDC84-205ENST00000528088 PTPRDP23468 1912 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 TMEM221A6NGB7 291 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 TMEM229AB2RXF0 380 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 M0R296 226 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 CILPO75339 1184 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 SOAT2O75908 522 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 HNRNPA1P09651 372 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC84-205ENST00000528088 CD19P15391 556 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 ZNF18P17022 549 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 ANXA13P27216 316 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 USP8P40818 1118 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 TUFMP49411 452 aaKnown RBP11.69□□□□□ -0.54
CCDC84-205ENST00000528088 EPHB3P54753 998 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 IQCB1Q15051 598 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 PTPN21Q16825 1174 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 ARHGAP44Q17R89 818 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 TMEM270Q6UE05 265 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 LIMS2Q7Z4I7 341 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 TTC9BQ8N6N2 239 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 MYCBPAPQ8TBZ2 947 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 PCED1BQ96HM7 432 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 FAXDC2Q96IV6 333 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 ZNF512Q96ME7 567 aaPredicted RBP11.69□□□□□ -0.54
CCDC84-205ENST00000528088 HEXIM2Q96MH2 286 aaKnown RBP11.69□□□□□ -0.54
CCDC84-205ENST00000528088 LPIN3Q9BQK8 851 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 CRTAC1Q9NQ79 661 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 ZNF358Q9NW07 568 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 APEX2Q9UBZ4 518 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 LIMA1Q9UHB6 759 aaKnown RBP11.69□□□□□ -0.54
CCDC84-205ENST00000528088 MAFFQ9ULX9 164 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 NR2E1Q9Y466 385 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 DOCK6Q96HP0 2047 aa11.69□□□□□ -0.54
CCDC84-205ENST00000528088 MYO10Q9HD67 2058 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 LGALS16A8MUM7 142 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 ICMTO60725 284 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 CCDC130P13994 396 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 BDNFP23560 247 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 CYP2F1P24903 491 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 PON1P27169 355 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 ADORA2BP29275 332 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 GRIK1P39086 918 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 MFAP3P55082 362 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 RPL10AP62906 217 aaKnown RBP11.68□□□□□ -0.54
CCDC84-205ENST00000528088 INCA1Q0VD86 236 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 RAPGEF1Q13905 1077 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 GJB7Q6PEY0 223 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 GRASPQ7Z6J2 395 aaPredicted RBP11.68□□□□□ -0.54
CCDC84-205ENST00000528088 LMO3Q8TAP4 145 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 GIPC2Q8TF65 315 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 KAT5Q92993 513 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 ZNF707Q96C28 371 aaPredicted RBP11.68□□□□□ -0.54
CCDC84-205ENST00000528088 ASIC4Q96FT7 647 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 FAM81BQ96LP2 452 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 TWNKQ96RR1 684 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 RHOBTB2Q9BYZ6 727 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 PRKD2Q9BZL6 878 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 ELOVL4Q9GZR5 314 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 CRISPLD1Q9H336 500 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 HCN4Q9Y3Q4 1203 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 NME7Q9Y5B8 376 aa11.68□□□□□ -0.54
CCDC84-205ENST00000528088 MUC6Q6W4X9 2439 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 CLDN5O00501 218 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 PDGFBP01127 241 aaPredicted RBP11.67□□□□□ -0.54
CCDC84-205ENST00000528088 HAPLN1P10915 354 aaPredicted RBP11.67□□□□□ -0.54
CCDC84-205ENST00000528088 HOXA9P31269 272 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 ZNF445P59923 1031 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 APBA1Q02410 837 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 GCNT1Q02742 428 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 SIGLEC14Q08ET2 396 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 FAM171BQ6P995 826 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 RTL10Q7L3V2 364 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 ENOSF1Q7L5Y1 443 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 ITIH5Q86UX2 942 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 C12orf29Q8N999 325 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 TDRD5Q8NAT2 981 aaKnown RBP11.67□□□□□ -0.54
CCDC84-205ENST00000528088 CMASQ8NFW8 434 aaPredicted RBP11.67□□□□□ -0.54
CCDC84-205ENST00000528088 SLC2A14Q8TDB8 520 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 TMEM176AQ96HP8 235 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 FUBP3Q96I24 572 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC84-205ENST00000528088 CORO1BQ9BR76 489 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 ZNF518BQ9C0D4 1074 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 ABCB6Q9NP58 842 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 FAM207AQ9NSI2 230 aaPredicted RBP11.67□□□□□ -0.54
CCDC84-205ENST00000528088 MAGED2Q9UNF1 606 aaPredicted RBP11.67□□□□□ -0.54
CCDC84-205ENST00000528088 ZDBF2Q9HCK1 2354 aa11.67□□□□□ -0.54
CCDC84-205ENST00000528088 VNN2O95498 520 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms