RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 SENP6Q9GZR1 1112 aaPredicted RBP13□□□□□ -0.33
TSKU-203ENST00000527881 TBCCD1Q9NVR7 557 aa13□□□□□ -0.33
TSKU-203ENST00000527881 XPO7Q9UIA9 1087 aaKnown RBP13□□□□□ -0.33
TSKU-203ENST00000527881 GNEQ9Y223 722 aaKnown RBP13□□□□□ -0.33
TSKU-203ENST00000527881 RREB1Q92766 1687 aa13□□□□□ -0.33
TSKU-203ENST00000527881 HTR3EA5X5Y0 456 aa13□□□□□ -0.33
TSKU-203ENST00000527881 E9PBE3 544 aa13□□□□□ -0.33
TSKU-203ENST00000527881 FAM86B1E9PN63 330 aa13□□□□□ -0.33
TSKU-203ENST00000527881 NOP56O00567 594 aaKnown RBP13□□□□□ -0.33
TSKU-203ENST00000527881 CFLARO15519 480 aa13□□□□□ -0.33
TSKU-203ENST00000527881 FAM86B2P0C5J1 330 aa13□□□□□ -0.33
TSKU-203ENST00000527881 ADSSP30520 456 aa13□□□□□ -0.33
TSKU-203ENST00000527881 STAT2P52630 851 aa13□□□□□ -0.33
TSKU-203ENST00000527881 GSTM4Q03013 218 aa13□□□□□ -0.33
TSKU-203ENST00000527881 SPIRE1Q08AE8 756 aa13□□□□□ -0.33
TSKU-203ENST00000527881 PDAP1Q13442 181 aaKnown RBP13□□□□□ -0.33
TSKU-203ENST00000527881 CIAPIN1Q6FI81 312 aa13□□□□□ -0.33
TSKU-203ENST00000527881 TMEM110Q86TL2 294 aa13□□□□□ -0.33
TSKU-203ENST00000527881 BBS5Q8N3I7 341 aa13□□□□□ -0.33
TSKU-203ENST00000527881 MARVELD2Q8N4S9 558 aa13□□□□□ -0.33
TSKU-203ENST00000527881 TSPAN14Q8NG11 270 aa13□□□□□ -0.33
TSKU-203ENST00000527881 EXD1Q8NHP7 514 aa13□□□□□ -0.33
TSKU-203ENST00000527881 THAP11Q96EK4 314 aa13□□□□□ -0.33
TSKU-203ENST00000527881 MPHOSPH6Q99547 160 aaKnown RBP13□□□□□ -0.33
TSKU-203ENST00000527881 CCDC106Q9BWC9 280 aa13□□□□□ -0.33
TSKU-203ENST00000527881 ARMC7Q9H6L4 198 aa13□□□□□ -0.33
TSKU-203ENST00000527881 SH3PXD2BA1X283 911 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 RGL2O15211 777 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 MSH4O15457 936 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 PSTPIP1O43586 416 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 MYBPC1Q00872 1141 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 FAM182AQ5T1J6 154 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 CDHR3Q6ZTQ4 885 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 PPIL6Q8IXY8 311 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 RNF169Q8NCN4 708 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 SHC3Q92529 594 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 CASP10Q92851 521 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 ATRNL1Q5VV63 1379 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 FBP2O00757 339 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 KRT37O76014 449 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 RBP3P10745 1247 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 RXRGP48443 463 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 EIF2B2P49770 351 aaKnown RBP12.99□□□□□ -0.33
TSKU-203ENST00000527881 POTEHQ6S545 545 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 RIN3Q8TB24 985 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 TMIGD2Q96BF3 282 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 GPR101Q96P66 508 aaPredicted RBP12.99□□□□□ -0.33
TSKU-203ENST00000527881 DMAC2Q9NW81 257 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 HSPBP1Q9NZL4 362 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 PKD2L1Q9P0L9 805 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 DNAJC16Q9Y2G8 782 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 TRIM17Q9Y577 477 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 ATAD5Q96QE3 1844 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 DDX39AO00148 427 aaKnown RBP12.99□□□□□ -0.33
TSKU-203ENST00000527881 SLITRK3O94933 977 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 TAL1P17542 331 aaPredicted RBP12.99□□□□□ -0.33
TSKU-203ENST00000527881 PSMC3P17980 439 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 NFKBIAP25963 317 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 ELK3P41970 407 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 UBXN2AP68543 259 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 RELAQ04206 551 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 SNAPC2Q13487 334 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 ERI1Q8IV48 349 aaKnown RBP12.99□□□□□ -0.33
TSKU-203ENST00000527881 CCDC33Q8N5R6 958 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 RNF148Q8N7C7 305 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 PPP4R1Q8TF05 950 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 SEMA4DQ92854 862 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 FAM84AQ96KN4 292 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 POLIQ9UNA4 740 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 COQ6Q9Y2Z9 468 aa12.99□□□□□ -0.33
TSKU-203ENST00000527881 H0YIN7 160 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 PLSCR1O15162 318 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 P4HA2O15460 535 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 KLHL2O95198 593 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 COL6A2P12110 1019 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 ETV4P43268 484 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 IGBP1P78318 339 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 ANKDD1AQ495B1 522 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 PDCD4Q53EL6 469 aaKnown RBP12.98□□□□□ -0.33
TSKU-203ENST00000527881 C1orf186Q6ZWK4 172 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 MIER3Q7Z3K6 550 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 KATNAL2Q8IYT4 538 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 AHI1Q8N157 1196 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 LARGE2Q8N3Y3 721 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 TRIM11Q96F44 468 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 FAM20AQ96MK3 541 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 SH2D3AQ9BRG2 576 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 GLT8D2Q9H1C3 349 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 XAB2Q9HCS7 855 aaKnown RBP12.98□□□□□ -0.33
TSKU-203ENST00000527881 TOPORSQ9NS56 1045 aaPredicted RBP12.98□□□□□ -0.33
TSKU-203ENST00000527881 TRNAU1APQ9NX07 287 aaKnown RBP12.98□□□□□ -0.33
TSKU-203ENST00000527881 SEL1LQ9UBV2 794 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 ZNF652Q9Y2D9 606 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 ANKRD36CQ5JPF3 1778 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 AIM2O14862 343 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 SLC26A4O43511 780 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 LYPLA1O75608 230 aaPredicted RBP12.98□□□□□ -0.33
TSKU-203ENST00000527881 PAX3P23760 479 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 SLC5A3P53794 718 aa12.98□□□□□ -0.33
TSKU-203ENST00000527881 NRF1Q16656 503 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms