RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 NOVA1P51513 510 aaKnown RBP25.12■■□□□ 1.61
CPSF1-202ENST00000527827 MRPS21P82921 87 aaKnown RBP25.12■■□□□ 1.61
CPSF1-202ENST00000527827 TAF10Q12962 218 aa25.12■■□□□ 1.61
CPSF1-202ENST00000527827 E2F4Q16254 413 aa25.12■■□□□ 1.61
CPSF1-202ENST00000527827 EPM2AIP1Q7L775 607 aaPredicted RBP25.12■■□□□ 1.61
CPSF1-202ENST00000527827 HS2ST1Q7LGA3 356 aa25.12■■□□□ 1.61
CPSF1-202ENST00000527827 RDH13Q8NBN7 331 aa25.12■■□□□ 1.61
CPSF1-202ENST00000527827 SNX25Q9H3E2 840 aa25.12■■□□□ 1.61
CPSF1-202ENST00000527827 DPEP3Q9H4B8 488 aa25.12■■□□□ 1.61
CPSF1-202ENST00000527827 KBTBD4Q9NVX7 518 aa25.12■■□□□ 1.61
CPSF1-202ENST00000527827 MTMR6Q9Y217 621 aa25.12■■□□□ 1.61
CPSF1-202ENST00000527827 MYO18AQ92614 2054 aaKnown RBP25.11■■□□□ 1.61
CPSF1-202ENST00000527827 PATE3B3GLJ2 98 aa25.11■■□□□ 1.61
CPSF1-202ENST00000527827 KHNYNO15037 678 aaKnown RBP25.11■■□□□ 1.61
CPSF1-202ENST00000527827 EIF3DO15371 548 aaKnown RBP eCLIP25.11■■□□□ 1.61
CPSF1-202ENST00000527827 TGFB1I1O43294 461 aa25.11■■□□□ 1.61
CPSF1-202ENST00000527827 FAM163BP0C2L3 166 aa25.11■■□□□ 1.61
CPSF1-202ENST00000527827 DLATP10515 647 aaKnown RBP25.11■■□□□ 1.61
CPSF1-202ENST00000527827 PTPN1P18031 435 aaKnown RBP25.11■■□□□ 1.61
CPSF1-202ENST00000527827 SNRNP35Q16560 246 aaKnown RBP25.11■■□□□ 1.61
CPSF1-202ENST00000527827 RHBDF2Q6PJF5 856 aa25.11■■□□□ 1.61
CPSF1-202ENST00000527827 C12orf40Q86WS4 652 aa25.11■■□□□ 1.61
CPSF1-202ENST00000527827 OR6B3Q8NGW1 331 aa25.11■■□□□ 1.61
CPSF1-202ENST00000527827 OLIG1Q8TAK6 271 aa25.11■■□□□ 1.61
CPSF1-202ENST00000527827 ZNF507Q8TCN5 953 aa25.11■■□□□ 1.61
CPSF1-202ENST00000527827 TRIM9Q9C026 710 aa25.11■■□□□ 1.61
CPSF1-202ENST00000527827 CFAP97Q9P2B7 532 aa25.11■■□□□ 1.61
CPSF1-202ENST00000527827 TNRC6BQ9UPQ9 1833 aaKnown RBP25.11■■□□□ 1.61
CPSF1-202ENST00000527827 SLC9A3R1O14745 358 aaPredicted RBP25.1■■□□□ 1.61
CPSF1-202ENST00000527827 ABL1P00519 1130 aa25.1■■□□□ 1.61
CPSF1-202ENST00000527827 NASPP49321 788 aaPredicted RBP25.1■■□□□ 1.61
CPSF1-202ENST00000527827 TDRD10Q5VZ19 366 aaKnown RBP25.1■■□□□ 1.61
CPSF1-202ENST00000527827 CYP2U1Q7Z449 544 aa25.1■■□□□ 1.61
CPSF1-202ENST00000527827 ALLCQ8N6M5 410 aa25.1■■□□□ 1.61
CPSF1-202ENST00000527827 IL17RCQ8NAC3 791 aa25.1■■□□□ 1.61
CPSF1-202ENST00000527827 PNKPQ96T60 521 aa25.1■■□□□ 1.61
CPSF1-202ENST00000527827 CGRRF1Q99675 332 aa25.1■■□□□ 1.61
CPSF1-202ENST00000527827 ZNF518BQ9C0D4 1074 aa25.1■■□□□ 1.61
CPSF1-202ENST00000527827 AGPAT3Q9NRZ7 376 aa25.1■■□□□ 1.61
CPSF1-202ENST00000527827 CLDN5O00501 218 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 CDX4O14627 284 aaPredicted RBP25.09■■□□□ 1.61
CPSF1-202ENST00000527827 TNNI1P19237 187 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 EIF2DP41214 584 aaKnown RBP25.09■■□□□ 1.61
CPSF1-202ENST00000527827 DHPSP49366 369 aaPredicted RBP25.09■■□□□ 1.61
CPSF1-202ENST00000527827 CYP24A1Q07973 514 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 PSMD6Q15008 389 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 WDR72Q3MJ13 1102 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 EMC10Q5UCC4 262 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 DAB2IPQ5VWQ8 1189 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 TTC30AQ86WT1 665 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 TXNDC5Q8NBS9 432 aaKnown RBP25.09■■□□□ 1.61
CPSF1-202ENST00000527827 ZNF516Q92618 1163 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 SLITRK1Q96PX8 696 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 B3GNT5Q9BYG0 378 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 LRRC27Q9C0I9 530 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 ELOVL4Q9GZR5 314 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 GZF1Q9H116 711 aaPredicted RBP25.09■■□□□ 1.61
CPSF1-202ENST00000527827 TMEM9BQ9NQ34 198 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 PLXND1Q9Y4D7 1925 aa25.09■■□□□ 1.61
CPSF1-202ENST00000527827 ASCC3Q8N3C0 2202 aaKnown RBP25.08■■□□□ 1.61
CPSF1-202ENST00000527827 A0A0A0MRY4 1105 aa25.08■■□□□ 1.61
CPSF1-202ENST00000527827 SGK1O00141 431 aa25.08■■□□□ 1.61
CPSF1-202ENST00000527827 CLIC2O15247 247 aa25.08■■□□□ 1.61
CPSF1-202ENST00000527827 KAT7O95251 611 aa25.08■■□□□ 1.61
CPSF1-202ENST00000527827 KLF8O95600 359 aaPredicted RBP25.08■■□□□ 1.61
CPSF1-202ENST00000527827 TIE1P35590 1138 aa25.08■■□□□ 1.61
CPSF1-202ENST00000527827 KIR2DL1P43626 348 aaPredicted RBP25.08■■□□□ 1.61
CPSF1-202ENST00000527827 IFRD2Q12894 506 aaPredicted RBP25.08■■□□□ 1.61
CPSF1-202ENST00000527827 SH3PXD2AQ5TCZ1 1133 aa25.08■■□□□ 1.61
CPSF1-202ENST00000527827 LINC00301Q8NCQ3 95 aa25.08■■□□□ 1.61
CPSF1-202ENST00000527827 RLN3Q8WXF3 142 aa25.08■■□□□ 1.61
CPSF1-202ENST00000527827 CCDC127Q96BQ5 260 aa25.08■■□□□ 1.61
CPSF1-202ENST00000527827 FNBP1Q96RU3 617 aa25.08■■□□□ 1.61
CPSF1-202ENST00000527827 GON4LQ3T8J9 2241 aa25.08■■□□□ 1.6
CPSF1-202ENST00000527827 PI4KAP42356 2102 aa25.07■■□□□ 1.6
CPSF1-202ENST00000527827 APODP05090 189 aa25.07■■□□□ 1.6
CPSF1-202ENST00000527827 MBL2P11226 248 aaPredicted RBP25.07■■□□□ 1.6
CPSF1-202ENST00000527827 P2RY2P41231 377 aa25.07■■□□□ 1.6
CPSF1-202ENST00000527827 TNNC1P63316 161 aa25.07■■□□□ 1.6
CPSF1-202ENST00000527827 ASIC1P78348 528 aa25.07■■□□□ 1.6
CPSF1-202ENST00000527827 IRX4P78413 519 aa25.07■■□□□ 1.6
CPSF1-202ENST00000527827 HSF5Q4G112 596 aaPredicted RBP25.07■■□□□ 1.6
CPSF1-202ENST00000527827 FAM26FQ5R3K3 315 aa25.07■■□□□ 1.6
CPSF1-202ENST00000527827 CNNM4Q6P4Q7 775 aa25.07■■□□□ 1.6
CPSF1-202ENST00000527827 DDX42Q86XP3 938 aaKnown RBP eCLIP25.07■■□□□ 1.6
CPSF1-202ENST00000527827 NUP93Q8N1F7 819 aa25.07■■□□□ 1.6
CPSF1-202ENST00000527827 FRMD1Q8N878 549 aa25.07■■□□□ 1.6
CPSF1-202ENST00000527827 XYLT2Q9H1B5 865 aa25.07■■□□□ 1.6
CPSF1-202ENST00000527827 CUEDC2Q9H467 287 aa25.07■■□□□ 1.6
CPSF1-202ENST00000527827 ZSCAN16Q9H4T2 348 aaPredicted RBP25.07■■□□□ 1.6
CPSF1-202ENST00000527827 WASF3Q9UPY6 502 aa25.07■■□□□ 1.6
CPSF1-202ENST00000527827 ALDH1A2O94788 518 aa25.06■■□□□ 1.6
CPSF1-202ENST00000527827 STAU1O95793 577 aaKnown RBP25.06■■□□□ 1.6
CPSF1-202ENST00000527827 ADH1CP00326 375 aa25.06■■□□□ 1.6
CPSF1-202ENST00000527827 PROS1P07225 676 aa25.06■■□□□ 1.6
CPSF1-202ENST00000527827 ADH5P11766 374 aa25.06■■□□□ 1.6
CPSF1-202ENST00000527827 YWHAQP27348 245 aa25.06■■□□□ 1.6
CPSF1-202ENST00000527827 CYP2J2P51589 502 aa25.06■■□□□ 1.6
CPSF1-202ENST00000527827 MYL6P60660 151 aa25.06■■□□□ 1.6
CPSF1-202ENST00000527827 KDSRQ06136 332 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms