RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 SNX30Q5VWJ9 437 aa11.87□□□□□ -0.51
CTSB-214ENST00000527243 GPRIN1Q7Z2K8 1008 aa11.87□□□□□ -0.51
CTSB-214ENST00000527243 MAB21L3Q8N8X9 362 aa11.87□□□□□ -0.51
CTSB-214ENST00000527243 SCAMP5Q8TAC9 235 aa11.87□□□□□ -0.51
CTSB-214ENST00000527243 OVCA2Q8WZ82 227 aa11.87□□□□□ -0.51
CTSB-214ENST00000527243 DNASE1L2Q92874 299 aa11.87□□□□□ -0.51
CTSB-214ENST00000527243 ZSWIM1Q9BR11 485 aa11.87□□□□□ -0.51
CTSB-214ENST00000527243 DDX23Q9BUQ8 820 aaKnown RBP11.87□□□□□ -0.51
CTSB-214ENST00000527243 TRMT61BQ9BVS5 477 aaKnown RBP11.87□□□□□ -0.51
CTSB-214ENST00000527243 DUSP16Q9BY84 665 aa11.87□□□□□ -0.51
CTSB-214ENST00000527243 SMG9Q9H0W8 520 aaKnown RBP11.87□□□□□ -0.51
CTSB-214ENST00000527243 ARHGEF3Q9NR81 526 aa11.87□□□□□ -0.51
CTSB-214ENST00000527243 SAMSN1Q9NSI8 373 aaKnown RBP11.87□□□□□ -0.51
CTSB-214ENST00000527243 COMMD8Q9NX08 183 aa11.87□□□□□ -0.51
CTSB-214ENST00000527243 EHD2Q9NZN4 543 aa11.87□□□□□ -0.51
CTSB-214ENST00000527243 CCL26Q9Y258 94 aa11.87□□□□□ -0.51
CTSB-214ENST00000527243 DENND4CQ5VZ89 1909 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 C2orf78A6NCI8 922 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 O00370 1275 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 CHADO15335 359 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 ADCY5O95622 1261 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 PAEPP09466 180 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 TCF3P15923 654 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 YWHAQP27348 245 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 ZNF165P49910 485 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 MAP3K7CLP57077 242 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 STARD6P59095 220 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 PFKPQ01813 784 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 USP4Q13107 963 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 MAN2A1Q16706 1144 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 PKDCCQ504Y2 493 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 SMYD5Q6GMV2 418 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 TRIM65Q6PJ69 517 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 RRAGAQ7L523 313 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.86□□□□□ -0.51
CTSB-214ENST00000527243 TTC30AQ86WT1 665 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 GPIHBP1Q8IV16 184 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 FAM114A1Q8IWE2 563 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 SIX5Q8N196 739 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 PPM1KQ8N3J5 372 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 CELF5Q8N6W0 485 aaKnown RBP11.86□□□□□ -0.51
CTSB-214ENST00000527243 TFAP2BQ92481 460 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 JAKMIP2Q96AA8 810 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 HEXIM2Q96MH2 286 aaKnown RBP11.86□□□□□ -0.51
CTSB-214ENST00000527243 CRACR2AQ9BSW2 395 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 UBXN6Q9BZV1 441 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 KIF9Q9HAQ2 790 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 SIX2Q9NPC8 291 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 TRPM5Q9NZQ8 1165 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 FBXL21Q9UKT6 434 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 ZKSCAN5Q9Y2L8 839 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 NFE2L3Q9Y4A8 694 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 OBSL1O75147 1896 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 COL4A2P08572 1712 aa11.86□□□□□ -0.51
CTSB-214ENST00000527243 BECN2A8MW95 431 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 TRIM21P19474 475 aaKnown RBP11.85□□□□□ -0.51
CTSB-214ENST00000527243 SLC9A1P19634 815 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 EEF1GP26641 437 aaKnown RBP11.85□□□□□ -0.51
CTSB-214ENST00000527243 PON1P27169 355 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 GDI1P31150 447 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 MTIF2P46199 727 aaKnown RBP11.85□□□□□ -0.51
CTSB-214ENST00000527243 PGFP49763 221 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 CLCN5P51795 746 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 KIF11P52732 1056 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 VCPP55072 806 aaKnown RBP11.85□□□□□ -0.51
CTSB-214ENST00000527243 SLC7A9P82251 487 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 ZXDBP98169 803 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 APBA1Q02410 837 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 PRKCQQ04759 706 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 NCAPHQ15003 741 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 MLF2Q15773 248 aaPredicted RBP11.85□□□□□ -0.51
CTSB-214ENST00000527243 ZNF77Q15935 545 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 TPD52L1Q16890 204 aaPredicted RBP11.85□□□□□ -0.51
CTSB-214ENST00000527243 VWA3BQ502W6 1294 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 SLC44A4Q53GD3 710 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 TCP11X2Q5H9J9 407 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 GBP6Q6ZN66 633 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 ZNF687Q8N1G0 1237 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 ANKRD52Q8NB46 1076 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 PDZD8Q8NEN9 1154 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 BPIFB1Q8TDL5 484 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 IRF7Q92985 503 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 FBXO32Q969P5 355 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 SLITRK1Q96PX8 696 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 CYP2S1Q96SQ9 504 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 FAM83CQ9BQN1 747 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 TUBGCP2Q9BSJ2 902 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 RNF38Q9H0F5 515 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 HSD3B7Q9H2F3 369 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 NDST4Q9H3R1 872 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 CBX8Q9HC52 389 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 TDP1Q9NUW8 608 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 KIAA1257Q9ULG3 409 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 CA14Q9ULX7 337 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 ARHGAP26Q9UNA1 814 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 USP3Q9Y6I4 520 aa11.85□□□□□ -0.51
CTSB-214ENST00000527243 NUP210Q8TEM1 1887 aaPredicted RBP11.85□□□□□ -0.51
CTSB-214ENST00000527243 KIF26AQ9ULI4 1882 aaPredicted RBP11.85□□□□□ -0.51
CTSB-214ENST00000527243 ANAPC1Q9H1A4 1944 aa11.84□□□□□ -0.51
CTSB-214ENST00000527243 TRAV19A0A0A6YYK7 116 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms