RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 A0A1W2PPM1 405 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 C2CD4BA6NLJ0 364 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 BANF1O75531 89 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 SPAG6O75602 509 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 TMEM63AO94886 807 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 UNC5CO95185 931 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 ITGBL1O95965 494 aaPredicted RBP11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 INSRRP14616 1297 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 RBP5P82980 135 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 GAD2Q05329 585 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 ORC1Q13415 861 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 LAMC2Q13753 1193 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 NOMO1Q15155 1222 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 SLC1A5Q15758 541 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 Q3C1V9 767 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 SLC10A6Q3KNW5 377 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 SPDYAQ5MJ70 313 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 MAP7D3Q8IWC1 876 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 LINC01465Q8N7H1 131 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 FAM71DQ8N9W8 422 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 CYTH2Q99418 400 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 SGIP1Q9BQI5 828 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 FRMD8Q9BZ67 464 aaPredicted RBP11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 RNPEPQ9H4A4 650 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 C10orf88Q9H8K7 445 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
PTPMT1-204ENST00000527079 COL1A2P08123 1366 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 A0A087WZ62 844 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 PRPSAP2O60256 369 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 PSMC4P43686 418 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 CDH6P55285 790 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 BASP1P80723 227 aaKnown RBP11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 PPIL2Q13356 520 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 PDK2Q15119 407 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 SEPT7Q16181 437 aaKnown RBP11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 BBS9Q3SYG4 887 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 DARS2Q6PI48 645 aaKnown RBP11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 LVRNQ6Q4G3 990 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 ILDR2Q71H61 639 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 VSIG1Q86XK7 387 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 CEP57Q86XR8 500 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 SHCBP1Q8NEM2 672 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 ZNF398Q8TD17 642 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 MZB1Q8WU39 189 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 USP6NLQ92738 828 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 RAB3IPQ96QF0 476 aaPredicted RBP11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 NCAPGQ9BPX3 1015 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 FDXACB1Q9BRP7 624 aaPredicted RBP11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 WDR83Q9BRX9 315 aaKnown RBP11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 GRID1Q9ULK0 1009 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 TCRBV7S3A2A0A539 114 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 CFAP69A5D8W1 941 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 ADM5C9JUS6 153 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 CHADO15335 359 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 PDGFRAP16234 1089 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 NDST1P52848 882 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 IGBP1P78318 339 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 ARHGAP1Q07960 439 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 TAF5Q15542 800 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 BOLA3Q53S33 107 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 FASTKD5Q7L8L6 764 aaKnown RBP11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 ANKLE1Q8NAG6 615 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 AFG1LQ8WV93 481 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 DCAKDQ8WVC6 231 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 RXFP2Q8WXD0 754 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 ZNF75CPQ92670 426 aaPredicted RBP11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 ZBTB10Q96DT7 871 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 MRRFQ96E11 262 aaKnown RBP11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 ACAP3Q96P50 834 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 LRRC37BQ96QE4 947 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 PEBP4Q96S96 227 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 NT5C1AQ9BXI3 368 aa11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTPMT1-204ENST00000527079 IQANK1A0A1B0GTG1 560 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 DPYSL4O14531 572 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 LGALS2P05162 132 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 DESP17661 470 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 ARF4P18085 180 aaPredicted RBP11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 KCNJ11Q14654 390 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 FYB2Q5VWT5 728 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 MAP1SQ66K74 1059 aaPredicted RBP11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 OR6B2Q6IFH4 312 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 DLK2Q6UY11 383 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 CYP4V2Q6ZWL3 525 aaPredicted RBP11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 BANPQ8N9N5 519 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 UBA3Q8TBC4 463 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 TEKT4Q8WW24 435 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 RTP4Q96DX8 246 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 RNF157Q96PX1 679 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 TBCBQ99426 244 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 MYLK2Q9H1R3 596 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 VPS11Q9H270 941 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 GBA2Q9HCG7 927 aaPredicted RBP11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 SLCO1B3Q9NPD5 702 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 CYLDQ9NQC7 956 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 PDGFCQ9NRA1 345 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 DPP3Q9NY33 737 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 PAK5Q9P286 719 aa11.27□□□□□ -0.61
PTPMT1-204ENST00000527079 TSPAN16Q9UKR8 245 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms