RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 COPS2P61201 443 aa21.52■■□□□ 1.04
SMCO4-203ENST00000526869 NFE2Q16621 373 aaPredicted RBP21.52■■□□□ 1.04
SMCO4-203ENST00000526869 RAB41Q5JT25 222 aa21.52■■□□□ 1.04
SMCO4-203ENST00000526869 VARS2Q5ST30 1063 aaKnown RBP21.52■■□□□ 1.04
SMCO4-203ENST00000526869 ZNF280DQ6N043 979 aa21.52■■□□□ 1.04
SMCO4-203ENST00000526869 FUT10Q6P4F1 479 aa21.52■■□□□ 1.04
SMCO4-203ENST00000526869 RCOR2Q8IZ40 523 aa21.52■■□□□ 1.04
SMCO4-203ENST00000526869 SCML4Q8N228 414 aa21.52■■□□□ 1.04
SMCO4-203ENST00000526869 ZMIZ2Q8NF64 920 aa21.52■■□□□ 1.04
SMCO4-203ENST00000526869 MAIP1Q8WWC4 291 aa21.52■■□□□ 1.04
SMCO4-203ENST00000526869 ZNF689Q96CS4 500 aaPredicted RBP21.52■■□□□ 1.04
SMCO4-203ENST00000526869 FUBP3Q96I24 572 aaKnown RBP eCLIP21.52■■□□□ 1.04
SMCO4-203ENST00000526869 RBM41Q96IZ5 413 aaKnown RBP21.52■■□□□ 1.04
SMCO4-203ENST00000526869 PIWIL1Q96J94 861 aaKnown RBP21.52■■□□□ 1.04
SMCO4-203ENST00000526869 ANKZF1Q9H8Y5 726 aa21.52■■□□□ 1.04
SMCO4-203ENST00000526869 DMAP1Q9NPF5 467 aaPredicted RBP21.52■■□□□ 1.04
SMCO4-203ENST00000526869 PTPRDP23468 1912 aa21.52■■□□□ 1.04
SMCO4-203ENST00000526869 PATJQ8NI35 1801 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 HSF2BPO75031 334 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 BEST1O76090 585 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 ZRANB2O95218 330 aaKnown RBP eCLIP21.51■■□□□ 1.03
SMCO4-203ENST00000526869 EFEMP2O95967 443 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 SDC4P31431 198 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 PTPN7P35236 360 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 FLT3P36888 993 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 SSR1P43307 286 aaKnown RBP21.51■■□□□ 1.03
SMCO4-203ENST00000526869 WDR5P61964 334 aaKnown RBP21.51■■□□□ 1.03
SMCO4-203ENST00000526869 SLC25A11Q02978 314 aaKnown RBP21.51■■□□□ 1.03
SMCO4-203ENST00000526869 ADCY1Q08828 1119 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 ADIGQ0VDE8 80 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 FAM171A1Q5VUB5 890 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 TRNP1Q6NT89 227 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 LRRTM3Q86VH5 581 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 SLC13A5Q86YT5 568 aaPredicted RBP21.51■■□□□ 1.03
SMCO4-203ENST00000526869 SPATA2LQ8IUW3 424 aaPredicted RBP21.51■■□□□ 1.03
SMCO4-203ENST00000526869 SIX6OS1Q8N1H7 587 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 GPR62Q9BZJ7 368 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 SLITRK6Q9H5Y7 841 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 CWH43Q9H720 699 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 RC3H2Q9HBD1 1191 aaKnown RBP21.51■■□□□ 1.03
SMCO4-203ENST00000526869 CNGB3Q9NQW8 809 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 TMLHEQ9NVH6 421 aa21.51■■□□□ 1.03
SMCO4-203ENST00000526869 HHLA1C9JL84 531 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 H7C4K7 107 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 FSCN2O14926 492 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 DAB1O75553 588 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 UPP2O95045 317 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 MCM3P25205 808 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 TKTL1P51854 596 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 RNASE9P60153 205 aaKnown RBP21.5■■□□□ 1.03
SMCO4-203ENST00000526869 MRPS5P82675 430 aaKnown RBP21.5■■□□□ 1.03
SMCO4-203ENST00000526869 CCDC14Q49A88 953 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 DAB2IPQ5VWQ8 1189 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 C8orf74Q6P047 294 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 CMTR2Q8IYT2 770 aaKnown RBP21.5■■□□□ 1.03
SMCO4-203ENST00000526869 ARFGAP1Q8N6T3 406 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 IRGQQ8WZA9 623 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 TMEM209Q96SK2 561 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 DDX23Q9BUQ8 820 aaKnown RBP21.5■■□□□ 1.03
SMCO4-203ENST00000526869 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.5■■□□□ 1.03
SMCO4-203ENST00000526869 RAB21Q9UL25 225 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 MTUS1Q9ULD2 1270 aa21.5■■□□□ 1.03
SMCO4-203ENST00000526869 VWA8A3KMH1 1905 aa21.49■■□□□ 1.03
SMCO4-203ENST00000526869 RHOXF2BP0C7M4 288 aa21.49■■□□□ 1.03
SMCO4-203ENST00000526869 ALDH7A1P49419 539 aaKnown RBP21.49■■□□□ 1.03
SMCO4-203ENST00000526869 SMARCB1Q12824 385 aa21.49■■□□□ 1.03
SMCO4-203ENST00000526869 PPIGQ13427 754 aaKnown RBP eCLIP21.49■■□□□ 1.03
SMCO4-203ENST00000526869 CTXN3Q4LDR2 81 aa21.49■■□□□ 1.03
SMCO4-203ENST00000526869 WDR93Q6P2C0 686 aa21.49■■□□□ 1.03
SMCO4-203ENST00000526869 CLEC4CQ8WTT0 213 aa21.49■■□□□ 1.03
SMCO4-203ENST00000526869 RHOXF2Q9BQY4 288 aa21.49■■□□□ 1.03
SMCO4-203ENST00000526869 C11orf84Q9BUA3 381 aaPredicted RBP21.49■■□□□ 1.03
SMCO4-203ENST00000526869 HCSTQ9UBK5 93 aa21.49■■□□□ 1.03
SMCO4-203ENST00000526869 TBC1D4O60343 1298 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 KRT1P04264 644 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 TCF4P15884 667 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 H2AFXP16104 143 aaPredicted RBP21.48■■□□□ 1.03
SMCO4-203ENST00000526869 BDNFP23560 247 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 MIPP30301 263 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 MAGEA11P43364 429 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 CACNA2D1P54289 1103 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 DAOAP59103 153 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 DEFB103AP81534 67 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 TAF5Q15542 800 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 CYP1B1Q16678 543 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 AADACL2Q6P093 401 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 VSTM1Q6UX27 236 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 ANKS3Q6ZW76 656 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 RNF168Q8IYW5 571 aaPredicted RBP21.48■■□□□ 1.03
SMCO4-203ENST00000526869 CENPIQ92674 756 aaPredicted RBP21.48■■□□□ 1.03
SMCO4-203ENST00000526869 SLC2A13Q96QE2 648 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 KRT12Q99456 494 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 AP1M1Q9BXS5 423 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 PARD6BQ9BYG5 372 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 TMEM30AQ9NV96 361 aa21.48■■□□□ 1.03
SMCO4-203ENST00000526869 ARGLU1Q9NWB6 273 aaPredicted RBP21.48■■□□□ 1.03
SMCO4-203ENST00000526869 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.48■■□□□ 1.03
SMCO4-203ENST00000526869 COL4A4P53420 1690 aaPredicted RBP21.47■■□□□ 1.03
SMCO4-203ENST00000526869 PHF2O75151 1096 aa21.47■■□□□ 1.03
SMCO4-203ENST00000526869 GRAP2O75791 330 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms