RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 SYNCQ9H7C4 482 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 MANSC1Q9H8J5 431 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 SPON1Q9HCB6 807 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 INCENPQ9NQS7 918 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 PRDM8Q9NQV8 689 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 MTRRQ9UBK8 725 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 ADD3Q9UEY8 706 aaKnown RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 USP18Q9UMW8 372 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 C19orf53Q9UNZ5 99 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 SCAF8Q9UPN6 1271 aaKnown RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 TMEM5Q9Y2B1 443 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 MTO1Q9Y2Z2 717 aaKnown RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 TELO2Q9Y4R8 837 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 HS3ST4Q9Y661 456 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 CYP46A1Q9Y6A2 500 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 GPRASP1Q5JY77 1395 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 CCDC78A2IDD5 438 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 TMEM191CA6NGB0 347 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 TTC36A6NLP5 189 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 PI4K2BG5E9Z4 385 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 BTN3A1O00481 513 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 FCHO1O14526 889 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 AP3D1O14617 1153 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 SLC27A2O14975 620 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 OPHN1O60890 802 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 PEX11BO96011 259 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 PRKCBP05771 671 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 CSF1P09603 554 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZNF888P0CJ79 500 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 HSPA1AP0DMV8 641 aaKnown RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 HSPA1BP0DMV9 641 aaKnown RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 NR2F1P10589 423 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 LAMP2P13473 410 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 NPPBP16860 134 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 FAHP16930 419 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 PSMA4P25789 261 aaKnown RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 ABCD1P33897 745 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 MLH1P40692 756 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 TNNT3P45378 269 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 PNLIPRP1P54315 467 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 NRG3P56975 720 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 AP2B1P63010 937 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 IFI35P80217 286 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 TMF1P82094 1093 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 TLE1Q04724 770 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 GRIN1Q05586 938 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 CHAF1BQ13112 559 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 TARDBPQ13148 414 aaKnown RBP eCLIP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 BAK1Q16611 211 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 MAPKAPK3Q16644 382 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 TRIM71Q2Q1W2 868 aaKnown RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 DNAJC21Q5F1R6 531 aaKnown RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 FNDC7Q5VTL7 733 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 SNX30Q5VWJ9 437 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 NAA35Q5VZE5 725 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 NAA16Q6N069 864 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 GAREM2Q75VX8 874 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 R3HCC1LQ7Z5L2 792 aaKnown RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 ANKS1BQ7Z6G8 1248 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 SDCCAG8Q86SQ7 713 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 RSPH3Q86UC2 560 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 LCA5Q86VQ0 697 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 MICU3Q86XE3 530 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 ARMC8Q8IUR7 673 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 SLC44A2Q8IWA5 706 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 CARNMT1Q8N4J0 409 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 TMEM57Q8N5G2 664 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 VGLL2Q8N8G2 317 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 OR6Y1Q8NGX8 325 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 TBC1D22AQ8WUA7 517 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 CLEC4DQ8WXI8 215 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 MAML1Q92585 1016 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 HOXB13Q92826 284 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 SNX21Q969T3 373 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 RNF125Q96EQ8 232 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 FEM1CQ96JP0 617 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 JAKMIP1Q96N16 626 aaKnown RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 YME1L1Q96TA2 773 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 VRK1Q99986 396 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 RTKNQ9BST9 563 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZNF518BQ9C0D4 1074 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 PITHD1Q9GZP4 211 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 C12orf65Q9H3J6 166 aaKnown RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 TAF1DQ9H5J8 278 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 SMURF2Q9HAU4 748 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 GRPEL1Q9HAV7 217 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 EIF2B3Q9NR50 452 aaKnown RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 PARPBPQ9NWS1 579 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZNF212Q9UDV6 495 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 RPS6KA6Q9UK32 745 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 PCDHA6Q9UN73 950 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 PA2G4Q9UQ80 394 aaKnown RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 CNPY2Q9Y2B0 182 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 MED16Q9Y2X0 877 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 REXO2Q9Y3B8 237 aaKnown RBP3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 NR2E1Q9Y466 385 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 PCDHA1Q9Y5I3 950 aa3.36□□□□□ -1.87
TRAPPC4-207ENST00000526141 A0A0A6YYJ9 748 aa3.35□□□□□ -1.87
TRAPPC4-207ENST00000526141 C17orf113A0A1B0GUU1 675 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms