RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 SIRT6Q8N6T7 355 aa5.13□□□□□ -1.59
CSDE1-210ENST00000525878 C1GALT1C1Q96EU7 318 aa5.13□□□□□ -1.59
CSDE1-210ENST00000525878 MMS19Q96T76 1030 aa5.13□□□□□ -1.59
CSDE1-210ENST00000525878 MAP3K14Q99558 947 aa5.13□□□□□ -1.59
CSDE1-210ENST00000525878 DPH1Q9BZG8 443 aa5.13□□□□□ -1.59
CSDE1-210ENST00000525878 SLC12A5Q9H2X9 1139 aa5.13□□□□□ -1.59
CSDE1-210ENST00000525878 PIH1D1Q9NWS0 290 aaKnown RBP5.13□□□□□ -1.59
CSDE1-210ENST00000525878 FER1L4A9Z1Z3 1794 aa5.12□□□□□ -1.59
CSDE1-210ENST00000525878 TMEM232C9JQI7 657 aa5.12□□□□□ -1.59
CSDE1-210ENST00000525878 ADAM10O14672 748 aa5.12□□□□□ -1.59
CSDE1-210ENST00000525878 GKP32189 559 aa5.12□□□□□ -1.59
CSDE1-210ENST00000525878 THBS4P35443 961 aa5.12□□□□□ -1.59
CSDE1-210ENST00000525878 RAB1AP62820 205 aa5.12□□□□□ -1.59
CSDE1-210ENST00000525878 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-210ENST00000525878 DNAJC5GQ8N7S2 189 aa5.12□□□□□ -1.59
CSDE1-210ENST00000525878 KBTBD7Q8WVZ9 684 aa5.12□□□□□ -1.59
CSDE1-210ENST00000525878 CTHRC1Q96CG8 243 aa5.12□□□□□ -1.59
CSDE1-210ENST00000525878 P2RX7Q99572 595 aaKnown RBP5.12□□□□□ -1.59
CSDE1-210ENST00000525878 C17orf80Q9BSJ5 609 aa5.12□□□□□ -1.59
CSDE1-210ENST00000525878 TRIM54Q9BYV2 358 aa5.12□□□□□ -1.59
CSDE1-210ENST00000525878 ARMT1Q9H993 441 aa5.12□□□□□ -1.59
CSDE1-210ENST00000525878 CPA4Q9UI42 421 aa5.12□□□□□ -1.59
CSDE1-210ENST00000525878 FAM90A10PA6NDY2 464 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 MYO1CO00159 1063 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 PMPCBO75439 489 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 MT-CO3P00414 261 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 GHRHRQ02643 423 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 KRT17Q04695 432 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 FGL2Q14314 439 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 LEXMQ3ZCV2 418 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 C4orf46Q504U0 113 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 KRTAP5-11Q6L8G4 156 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 DEF8Q6ZN54 512 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 ZBTB46Q86UZ6 589 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 SLC15A4Q8N697 577 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 LINC01465Q8N7H1 131 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 NSMCE1Q8WV22 266 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 CCDC17Q96LX7 622 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 SIGLEC11Q96RL6 698 aa5.11□□□□□ -1.59
CSDE1-210ENST00000525878 GAR1Q9NY12 217 aaKnown RBP5.11□□□□□ -1.59
CSDE1-210ENST00000525878 M0R3H8 397 aa5.1□□□□□ -1.59
CSDE1-210ENST00000525878 NPR1P16066 1061 aa5.1□□□□□ -1.59
CSDE1-210ENST00000525878 LMAN2Q12907 356 aa5.1□□□□□ -1.59
CSDE1-210ENST00000525878 CTBP1Q13363 440 aa5.1□□□□□ -1.59
CSDE1-210ENST00000525878 MIDNQ504T8 468 aa5.1□□□□□ -1.59
CSDE1-210ENST00000525878 PLA1AQ53H76 456 aa5.1□□□□□ -1.59
CSDE1-210ENST00000525878 BRDTQ58F21 947 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-210ENST00000525878 LMBRD2Q68DH5 695 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-210ENST00000525878 GRAMD1CQ8IYS0 662 aa5.1□□□□□ -1.59
CSDE1-210ENST00000525878 BPIFB1Q8TDL5 484 aa5.1□□□□□ -1.59
CSDE1-210ENST00000525878 DIS3LQ8TF46 1054 aaKnown RBP5.1□□□□□ -1.59
CSDE1-210ENST00000525878 MAP4K1Q92918 833 aa5.1□□□□□ -1.59
CSDE1-210ENST00000525878 CUL5Q93034 780 aa5.1□□□□□ -1.59
CSDE1-210ENST00000525878 MARK4Q96L34 752 aa5.1□□□□□ -1.59
CSDE1-210ENST00000525878 PCDH12Q9NPG4 1184 aa5.1□□□□□ -1.59
CSDE1-210ENST00000525878 CNNM1Q9NRU3 951 aa5.1□□□□□ -1.59
CSDE1-210ENST00000525878 CNOT3O75175 753 aaKnown RBP5.09□□□□□ -1.59
CSDE1-210ENST00000525878 GCATO75600 419 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 ABLIM3O94929 683 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 OAZ2O95190 189 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 APEHP13798 732 aaKnown RBP5.09□□□□□ -1.59
CSDE1-210ENST00000525878 BCAT1P54687 386 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 PTCHD3Q3KNS1 767 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 CERCAMQ5T4B2 595 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 PTCHD4Q6ZW05 846 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 LIX1LQ8IVB5 337 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 OSR1Q8TAX0 266 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-210ENST00000525878 TMEM171Q8WVE6 324 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 IGFBPL1Q8WX77 278 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 PPP2R3CQ969Q6 453 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 GBA2Q9HCG7 927 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-210ENST00000525878 GABBR1Q9UBS5 961 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 STAP2Q9UGK3 403 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 ANKRD6Q9Y2G4 727 aa5.09□□□□□ -1.59
CSDE1-210ENST00000525878 ZMYM2Q9UBW7 1377 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 IGKV2D-30A0A075B6S6 120 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 H3BML4 177 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 BTN3A1O00481 513 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 TLR2O60603 784 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 PHKG2P15735 406 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 ATF7P17544 494 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-210ENST00000525878 NEK2P51955 445 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 PRKAG1P54619 331 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 SUMO2P61956 95 aaKnown RBP5.08□□□□□ -1.6
CSDE1-210ENST00000525878 CFHR1Q03591 330 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 CCNIQ14094 377 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 LARS2Q15031 903 aaKnown RBP5.08□□□□□ -1.6
CSDE1-210ENST00000525878 SEC23BQ15437 767 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 MEPCEQ7L2J0 689 aaKnown RBP5.08□□□□□ -1.6
CSDE1-210ENST00000525878 RAB11FIP4Q86YS3 637 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 MS4A7Q9GZW8 240 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-210ENST00000525878 SMURF2Q9HAU4 748 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 XPNPEP3Q9NQH7 507 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 HOMER2Q9NSB8 354 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 DRG1Q9Y295 367 aaKnown RBP5.08□□□□□ -1.6
CSDE1-210ENST00000525878 COL4A3BPQ9Y5P4 624 aa5.08□□□□□ -1.6
CSDE1-210ENST00000525878 CNTNAP2Q9UHC6 1331 aa5.07□□□□□ -1.6
CSDE1-210ENST00000525878 CCDC187A0A096LP49 1063 aa5.07□□□□□ -1.6
CSDE1-210ENST00000525878 CES2O00748 559 aa5.07□□□□□ -1.6
CSDE1-210ENST00000525878 OFD1O75665 1012 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms