RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 TRIM59Q8IWR1 403 aa13.54□□□□□ -0.24
CLP1-202ENST00000525602 CMTM8Q8IZV2 173 aa13.54□□□□□ -0.24
CLP1-202ENST00000525602 GPT2Q8TD30 523 aa13.54□□□□□ -0.24
CLP1-202ENST00000525602 LRRC3BQ96PB8 259 aa13.54□□□□□ -0.24
CLP1-202ENST00000525602 MED15Q96RN5 788 aa13.54□□□□□ -0.24
CLP1-202ENST00000525602 BRD9Q9H8M2 597 aa13.54□□□□□ -0.24
CLP1-202ENST00000525602 DMAP1Q9NPF5 467 aaPredicted RBP13.54□□□□□ -0.24
CLP1-202ENST00000525602 CISHQ9NSE2 258 aa13.54□□□□□ -0.24
CLP1-202ENST00000525602 EHD2Q9NZN4 543 aa13.54□□□□□ -0.24
CLP1-202ENST00000525602 MAP1BP46821 2468 aaKnown RBP13.54□□□□□ -0.24
CLP1-202ENST00000525602 TICRRQ7Z2Z1 1910 aa13.54□□□□□ -0.24
CLP1-202ENST00000525602 KMT2BQ9UMN6 2715 aaPredicted RBP13.53□□□□□ -0.24
CLP1-202ENST00000525602 CFAP47Q6ZTR5 3102 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 KANSL1LA0AUZ9 987 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 GOLGA6L22H0YM25 854 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 ZNF263O14978 683 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 FGFR1OPO95684 399 aaKnown RBP13.53□□□□□ -0.24
CLP1-202ENST00000525602 CCDC192P0DO97 292 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 AVPR1AP37288 418 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 PRKCQQ04759 706 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 CUL2Q13617 745 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 DPCR1Q3MIW9 517 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 SLC44A4Q53GD3 710 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 ZC3H14Q6PJT7 736 aaKnown RBP13.53□□□□□ -0.24
CLP1-202ENST00000525602 YAF2Q8IY57 180 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 NUP93Q8N1F7 819 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 TTC39CQ8N584 583 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 ZMIZ2Q8NF64 920 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 RUBCNQ92622 972 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 IRF7Q92985 503 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 KCNK16Q96T55 309 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 SMOQ99835 787 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 DDX23Q9BUQ8 820 aaKnown RBP13.53□□□□□ -0.24
CLP1-202ENST00000525602 SEMA4AQ9H3S1 761 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 FAM124BQ9H5Z6 455 aaPredicted RBP13.53□□□□□ -0.24
CLP1-202ENST00000525602 TRPC7Q9HCX4 862 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 CCL26Q9Y258 94 aa13.53□□□□□ -0.24
CLP1-202ENST00000525602 TRAV19A0A0A6YYK7 116 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 ARNTLO00327 626 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 TNFRSF10BO14763 440 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 CHADO15335 359 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 P4HA2O15460 535 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 BEST1O76090 585 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 AFPP02771 609 aaKnown RBP13.52□□□□□ -0.25
CLP1-202ENST00000525602 FAM200BP0CF97 657 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 ADORA2BP29275 332 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 SLC5A3P53794 718 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 MAP3K7CLP57077 242 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 KCNH2Q12809 1159 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 IFRD2Q12894 506 aaPredicted RBP13.52□□□□□ -0.25
CLP1-202ENST00000525602 LRMPQ12912 555 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 ZNF268Q14587 947 aaPredicted RBP13.52□□□□□ -0.25
CLP1-202ENST00000525602 ZNF394Q53GI3 561 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 TPRG1Q6ZUI0 275 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 CELF5Q8N6W0 485 aaKnown RBP13.52□□□□□ -0.25
CLP1-202ENST00000525602 BPIFB1Q8TDL5 484 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 USP13Q92995 863 aaPredicted RBP13.52□□□□□ -0.25
CLP1-202ENST00000525602 CYFIP2Q96F07 1278 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 SHDQ96IW2 340 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 CNOT6LQ96LI5 555 aaKnown RBP13.52□□□□□ -0.25
CLP1-202ENST00000525602 SLC22A12Q96S37 553 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 HNRNPABQ99729 332 aaKnown RBP13.52□□□□□ -0.25
CLP1-202ENST00000525602 DNAI2Q9GZS0 605 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 KIF9Q9HAQ2 790 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 CSNK1G1Q9HCP0 422 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 TRPV5Q9NQA5 729 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 HEBP1Q9NRV9 189 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 GCNT4Q9P109 453 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 MYH10P35580 1976 aa13.52□□□□□ -0.25
CLP1-202ENST00000525602 HELZP42694 1942 aaKnown RBP13.51□□□□□ -0.25
CLP1-202ENST00000525602 C2orf78A6NCI8 922 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 ZNF840PA6NDX5 716 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 SHISA7A6NL88 538 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 FAM170BA6NMN3 283 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 RTN3O95197 1032 aaPredicted RBP13.51□□□□□ -0.25
CLP1-202ENST00000525602 TBXAS1P24557 533 aaPredicted RBP13.51□□□□□ -0.25
CLP1-202ENST00000525602 TARSP26639 723 aaKnown RBP13.51□□□□□ -0.25
CLP1-202ENST00000525602 YWHAQP27348 245 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 RAD23BP54727 409 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 CSTF1Q05048 431 aaKnown RBP13.51□□□□□ -0.25
CLP1-202ENST00000525602 CETN1Q12798 172 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 TAF10Q12962 218 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 RSPO4Q2I0M5 234 aaPredicted RBP13.51□□□□□ -0.25
CLP1-202ENST00000525602 ARHGAP29Q52LW3 1261 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 CLEC20AQ6ZU45 233 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 UBR7Q8N806 425 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 SLC4A11Q8NBS3 891 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 LMO3Q8TAP4 145 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 RIN3Q8TB24 985 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 TMEM176AQ96HP8 235 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 NT5C1BQ96P26 610 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 SLITRK1Q96PX8 696 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 LTB4R2Q9NPC1 389 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 TDP1Q9NUW8 608 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 IL37Q9NZH6 218 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 TRPM5Q9NZQ8 1165 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 DACH1Q9UI36 760 aa13.51□□□□□ -0.25
CLP1-202ENST00000525602 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLP1-202ENST00000525602 CKMP06732 381 aa13.5□□□□□ -0.25
CLP1-202ENST00000525602 USP17L7P0C7H9 530 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms