RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 RPS9P46781 194 aaKnown RBP18.56■□□□□ 0.56
NR1H3-228ENST00000525441 FMO5P49326 533 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 SLC5A3P53794 718 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 STX17P56962 302 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 MTF1Q14872 753 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 PDGFRLQ15198 375 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 ITPRIPL2Q3MIP1 535 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 CLEC17AQ6ZS10 378 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 RALGPS2Q86X27 583 aaPredicted RBP18.56■□□□□ 0.56
NR1H3-228ENST00000525441 WHAMMQ8TF30 809 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 CLDN23Q96B33 292 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 SLC22A12Q96S37 553 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 CYP2S1Q96SQ9 504 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 SMOQ99835 787 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 CLSTN2Q9H4D0 955 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 CSNK1G1Q9HCP0 422 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 CISHQ9NSE2 258 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 ARHGAP26Q9UNA1 814 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 GREB1Q4ZG55 1949 aa18.56■□□□□ 0.56
NR1H3-228ENST00000525441 MIA3Q5JRA6 1907 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 TICRRQ7Z2Z1 1910 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 SPECC1L-ADORA2AF8WAN1 911 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 TNFRSF10BO14763 440 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 PMM2O15305 246 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 TCF3P15923 654 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 MAP3K7CLP57077 242 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 USP4Q13107 963 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 ZNF394Q53GI3 561 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 C1orf210Q8IVY1 113 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 TATDN2Q93075 761 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 HEXIM2Q96MH2 286 aaKnown RBP18.55■□□□□ 0.56
NR1H3-228ENST00000525441 FAM83CQ9BQN1 747 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 SRRTQ9BXP5 876 aaKnown RBP18.55■□□□□ 0.56
NR1H3-228ENST00000525441 FBXO44Q9H4M3 255 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 SPATA6Q9NWH7 488 aaPredicted RBP18.55■□□□□ 0.56
NR1H3-228ENST00000525441 GTSE1Q9NYZ3 720 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 IL37Q9NZH6 218 aa18.55■□□□□ 0.56
NR1H3-228ENST00000525441 SHISA7A6NL88 538 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 P4HA2O15460 535 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 CCDC192P0DO97 292 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 TBXAS1P24557 533 aaPredicted RBP18.54■□□□□ 0.56
NR1H3-228ENST00000525441 CTHP32929 405 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 IFNAR2P48551 515 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 SLC7A9P82251 487 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 AMPD2Q01433 879 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 TNK2Q07912 1038 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 CUL2Q13617 745 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 RUNX3Q13761 415 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 ZNF77Q15935 545 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 MLKLQ8NB16 471 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 TTC16Q8NEE8 873 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 ZMIZ2Q8NF64 920 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 SCAMP5Q8TAC9 235 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 TTC8Q8TAM2 541 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 SH3RF2Q8TEC5 729 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 TMEM176AQ96HP8 235 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 GBP4Q96PP9 640 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 IER2Q9BTL4 223 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 PNPLA8Q9NP80 782 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 FAM86C1Q9NVL1 165 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 RWDD2AQ9UIY3 292 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 COL4A2P08572 1712 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 COL4A3Q01955 1670 aa18.54■□□□□ 0.56
NR1H3-228ENST00000525441 OAS1P00973 400 aaKnown RBP18.53■□□□□ 0.56
NR1H3-228ENST00000525441 SOX9P48436 509 aa18.53■□□□□ 0.56
NR1H3-228ENST00000525441 MARSP56192 900 aaKnown RBP18.53■□□□□ 0.56
NR1H3-228ENST00000525441 LRRC32Q14392 662 aa18.53■□□□□ 0.56
NR1H3-228ENST00000525441 CLEC20AQ6ZU45 233 aa18.53■□□□□ 0.56
NR1H3-228ENST00000525441 DDX42Q86XP3 938 aaKnown RBP eCLIP18.53■□□□□ 0.56
NR1H3-228ENST00000525441 CPA6Q8N4T0 437 aa18.53■□□□□ 0.56
NR1H3-228ENST00000525441 KIAA1958Q8N8K9 716 aa18.53■□□□□ 0.56
NR1H3-228ENST00000525441 OSCP1Q8WVF1 389 aa18.53■□□□□ 0.56
NR1H3-228ENST00000525441 NT5C1BQ96P26 610 aa18.53■□□□□ 0.56
NR1H3-228ENST00000525441 ARID3AQ99856 593 aa18.53■□□□□ 0.56
NR1H3-228ENST00000525441 NUP62CLQ9H1M0 184 aa18.53■□□□□ 0.56
NR1H3-228ENST00000525441 EBF3Q9H4W6 596 aa18.53■□□□□ 0.56
NR1H3-228ENST00000525441 DUS2Q9NX74 493 aaKnown RBP18.53■□□□□ 0.56
NR1H3-228ENST00000525441 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.53■□□□□ 0.56
NR1H3-228ENST00000525441 WDFY4Q6ZS81 3184 aa18.53■□□□□ 0.56
NR1H3-228ENST00000525441 ANAPC1Q9H1A4 1944 aa18.53■□□□□ 0.56
NR1H3-228ENST00000525441 FAM92AA1XBS5 289 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 LAMTOR5O43504 91 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 BEST1O76090 585 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 OLFM2O95897 454 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 HOXD11P31277 338 aaPredicted RBP18.52■□□□□ 0.56
NR1H3-228ENST00000525441 TUBP50607 506 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 RAD23BP54727 409 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 SLC8A3P57103 927 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 LRMPQ12912 555 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 HECTD3Q5T447 861 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 SNX30Q5VWJ9 437 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 TRIM68Q6AZZ1 485 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 TRIM59Q8IWR1 403 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 ZNF687Q8N1G0 1237 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 SLC4A11Q8NBS3 891 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 ATP2A3Q93084 1043 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 EXOC4Q96A65 974 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 DUSP16Q9BY84 665 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 LMAN1LQ9HAT1 526 aa18.52■□□□□ 0.56
NR1H3-228ENST00000525441 HPS4Q9NQG7 708 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms