RNA–Protein interactions for RNA: ENST00000525293.5

CD44-216, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-216ENST00000525293 CYP1B1Q16678 543 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 PTCHD3Q3KNS1 767 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 DCAF12L1Q5VU92 463 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 FCRL6Q6DN72 434 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 ZNF425Q6IV72 752 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 SLC18B1Q6NT16 456 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 SWSAP1Q6NVH7 229 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 ZDHHC24Q6UX98 284 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 DPY19L3Q6ZPD9 716 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 CHPFQ8IZ52 775 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 TERB1Q8NA31 727 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 MAML1Q92585 1016 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 RUNDC1Q96C34 613 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 DAZAP1Q96EP5 407 aaKnown RBP2.9□□□□□ -1.95
CD44-216ENST00000525293 C5orf34Q96MH7 638 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 ASB2Q96Q27 587 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 C22orf23Q9BZE7 217 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 DPH1Q9BZG8 443 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 SEMA4CQ9C0C4 833 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 ZNF518BQ9C0D4 1074 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 NRIP3Q9NQ35 241 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 SACM1LQ9NTJ5 587 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 CPNE7Q9UBL6 633 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 GABRQQ9UN88 632 aa2.9□□□□□ -1.95
CD44-216ENST00000525293 MYO1FO00160 1098 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 TBX3O15119 743 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 PEX14O75381 377 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 TJP3O95049 919 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 TUBB4AP04350 444 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 PRKCBP05771 671 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 U2AF1L5P0DN76 240 aaPredicted RBP2.89□□□□□ -1.95
CD44-216ENST00000525293 FPR3P25089 353 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 ALDH5A1P51649 535 aaPredicted RBP2.89□□□□□ -1.95
CD44-216ENST00000525293 KRTAP10-11P60412 298 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 U2AF1Q01081 240 aaKnown RBP eCLIP2.89□□□□□ -1.95
CD44-216ENST00000525293 KLF9Q13886 244 aaPredicted RBP2.89□□□□□ -1.95
CD44-216ENST00000525293 CCNIQ14094 377 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 MLC1Q15049 377 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 CNN3Q15417 329 aaKnown RBP2.89□□□□□ -1.95
CD44-216ENST00000525293 PLEKHG6Q3KR16 790 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 SUPT20HL1Q3ZLR7 823 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 MINDY4Q4G0A6 757 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 ARHGAP29Q52LW3 1261 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 GORABQ5T7V8 394 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 FAM102BQ5T8I3 360 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 CXorf57Q6NSI4 855 aaKnown RBP2.89□□□□□ -1.95
CD44-216ENST00000525293 SLC2A7Q6PXP3 512 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 MTHFD1LQ6UB35 978 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 KIRREL2Q6UWL6 708 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 SERPINA13PQ6UXR4 307 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 CATSPERGQ6ZRH7 1159 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 RINLQ6ZS11 566 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 NEK8Q86SG6 692 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 SPARTQ8N0X7 666 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 OR56A3Q8NH54 315 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 DNAJB14Q8TBM8 379 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 RITA1Q96K30 269 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 PRR25Q96S07 402 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 THAP7Q9BT49 309 aaPredicted RBP2.89□□□□□ -1.95
CD44-216ENST00000525293 CIPCQ9C0C6 399 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 TMEM60Q9H2L4 133 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 BHMT2Q9H2M3 363 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 A1CFQ9NQ94 594 aaKnown RBP2.89□□□□□ -1.95
CD44-216ENST00000525293 STK32BQ9NY57 414 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 KLHL42Q9P2K6 505 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 L1RE1Q9UN81 338 aa2.89□□□□□ -1.95
CD44-216ENST00000525293 A6NNZ2 444 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 FAM227AF5H4B4 570 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 POC1B-GALNT4F8VUJ3 575 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 H7C1Q1 480 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 PYCARD-AS1I3L0S3 204 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 PSMD9O00233 223 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 CES2O00748 559 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 ADAMTS3O15072 1205 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 TP73O15350 636 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 RGS10O43665 173 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 RASSF9O75901 435 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 RASAL1O95294 804 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 SCGB1D2O95969 90 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 S100BP04271 92 aaPredicted RBP2.88□□□□□ -1.95
CD44-216ENST00000525293 BRAFP15056 766 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 ZKSCAN1P17029 563 aaPredicted RBP2.88□□□□□ -1.95
CD44-216ENST00000525293 PRKAR1BP31321 381 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 GKP32189 559 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 PPP2R5AQ15172 486 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 RALBP1Q15311 655 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 ETFDHQ16134 617 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 NFE2Q16621 373 aaPredicted RBP2.88□□□□□ -1.95
CD44-216ENST00000525293 RNASE12Q5GAN4 147 aaKnown RBP2.88□□□□□ -1.95
CD44-216ENST00000525293 CERCAMQ5T4B2 595 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 CACHD1Q5VU97 1274 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 C11orf87Q6NUJ2 197 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 MIS18BP1Q6P0N0 1132 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 APOA5Q6Q788 366 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 KCTD20Q7Z5Y7 419 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 MICU3Q86XE3 530 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 CNGA4Q8IV77 575 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 KIAA0319LQ8IZA0 1049 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 GALNT4Q8N4A0 578 aa2.88□□□□□ -1.95
CD44-216ENST00000525293 SIRT6Q8N6T7 355 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms