RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 SEMA4DQ92854 862 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 EEF2KMTQ96G04 330 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 TWNKQ96RR1 684 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 EBF3Q9H4W6 596 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 DMAP1Q9NPF5 467 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 ARHGAP26Q9UNA1 814 aa11.86□□□□□ -0.51
TRAPPC4-204ENST00000524797 WDFY4Q6ZS81 3184 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 TRIM49BA6NDI0 452 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 STX10O60499 249 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 KINO60870 393 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 YWHAQP27348 245 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 IFRD2Q12894 506 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 DGKKQ5KSL6 1271 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 ZC3H14Q6PJT7 736 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 CCDC150Q8NCX0 1101 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 ZMIZ2Q8NF64 920 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 SLC2A14Q8TDB8 520 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 SH3RF2Q8TEC5 729 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 SLITRK1Q96PX8 696 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 KCNK16Q96T55 309 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 SMOQ99835 787 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 SEMA4AQ9H3S1 761 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 KRT82Q9NSB4 513 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 RBM12Q9NTZ6 932 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 IL37Q9NZH6 218 aa11.85□□□□□ -0.51
TRAPPC4-204ENST00000524797 OTOL1A6NHN0 477 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 TNFRSF10BO14763 440 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 OLFM2O95897 454 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 IFNAR2P48551 515 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 MXI1P50539 228 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 SLC7A9P82251 487 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 LRRC63Q05C16 580 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 GAS6Q14393 721 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 ISM2Q6H9L7 571 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 MAMSTRQ6ZN01 415 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 WHAMMQ8TF30 809 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 OSCP1Q8WVF1 389 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 OVCA2Q8WZ82 227 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 NELL1Q92832 810 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 FBXO32Q969P5 355 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 CHFRQ96EP1 664 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 FAM49BQ9NUQ9 324 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 COMMD8Q9NX08 183 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 DUS2Q9NX74 493 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 WNT6Q9Y6F9 365 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 ATG2BQ96BY7 2078 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 LEFTY2O00292 366 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 BEST1O76090 585 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 ABL1P00519 1130 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 OAS1P00973 400 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 TDGF1P13385 188 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 CD44P16070 742 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 ADORA2BP29275 332 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 SLC5A3P53794 718 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 FKBP3Q00688 224 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 STIM1Q13586 685 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 TSSK4Q6SA08 328 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 CPA6Q8N4T0 437 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 C12orf29Q8N999 325 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 FBXL13Q8NEE6 735 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 PDZD8Q8NEN9 1154 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 SCAMP5Q8TAC9 235 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 DHTKD1Q96HY7 919 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 NT5C1AQ9BXI3 368 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 RNF38Q9H0F5 515 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 CSNK1G1Q9HCP0 422 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 RAB20Q9NX57 234 aa11.84□□□□□ -0.51
TRAPPC4-204ENST00000524797 MYOFQ9NZM1 2061 aa11.83□□□□□ -0.51
TRAPPC4-204ENST00000524797 PSMA7O14818 248 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 CILPO75339 1184 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 CD58P19256 250 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 CCR3P51677 355 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 ZXDBP98169 803 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 CCINQ13939 588 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 MORC3Q14149 939 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 EML3Q32P44 896 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 DCAF17Q5H9S7 520 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 TCERG1LQ5VWI1 586 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 FSTL4Q6MZW2 842 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 Q6ZS52 159 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 TTC16Q8NEE8 873 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 FAXDC2Q96IV6 333 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 HNRNPABQ99729 332 aaKnown RBP11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 DUSP9Q99956 384 aaKnown RBP11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 ECT2Q9H8V3 914 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 ZSCAN32Q9NX65 697 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 GMIPQ9P107 970 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 CPQQ9Y646 472 aa11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 ZFHX2Q9C0A1 2572 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC4-204ENST00000524797 FAM92AA1XBS5 289 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 PPP1R3GB7ZBB8 358 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 TRDMT1O14717 391 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 FAM200BP0CF97 657 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 TRIM21P19474 475 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 BMP6P22004 513 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 GJA4P35212 333 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 PPP1R2P41236 205 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 MAP3K7CLP57077 242 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 SATB1Q01826 763 aa11.82□□□□□ -0.52
TRAPPC4-204ENST00000524797 CBWD6Q4V339 395 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms