RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 KBTBD2Q8IY47 623 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 PHC3Q8NDX5 983 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 JOSD2Q8TAC2 188 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 DEPTORQ8TB45 409 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 CCDC110Q8TBZ0 833 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 ZFAND2BQ8WV99 257 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 TRAPPC9Q96Q05 1148 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 ZNF184Q99676 751 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-217ENST00000524534 PNPLA8Q9NP80 782 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 DDX43Q9NXZ2 648 aaKnown RBP12.01□□□□□ -0.49
PTPRK-217ENST00000524534 ARMCX1Q9P291 453 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 WDR35Q9P2L0 1181 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 PPME1Q9Y570 386 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 LRRIQ4A6NIV6 560 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 SNUPNO95149 360 aaKnown RBP12.01□□□□□ -0.49
PTPRK-217ENST00000524534 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-217ENST00000524534 KRT3P12035 628 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 HMGB2P26583 209 aaKnown RBP12.01□□□□□ -0.49
PTPRK-217ENST00000524534 MYL6P60660 151 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 SP4Q02446 784 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 PTPN20Q4JDL3 420 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 SEZ6Q53EL9 994 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 FOXB2Q5VYV0 432 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 AP1ARQ63HQ0 302 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 CDHR3Q6ZTQ4 885 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 ZC3H18Q86VM9 953 aaKnown RBP12.01□□□□□ -0.49
PTPRK-217ENST00000524534 TREML1Q86YW5 311 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 BRSK2Q8IWQ3 736 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 CEP120Q8N960 986 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 C7orf26Q96N11 449 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 SRPK1Q96SB4 655 aaKnown RBP12.01□□□□□ -0.49
PTPRK-217ENST00000524534 LBHD1Q9BQE6 289 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-217ENST00000524534 NIF3L1Q9GZT8 377 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 DHX33Q9H6R0 707 aaKnown RBP12.01□□□□□ -0.49
PTPRK-217ENST00000524534 PLA2G4CQ9UP65 541 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 WASF2Q9Y6W5 498 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 EP400Q96L91 3159 aa12.01□□□□□ -0.49
PTPRK-217ENST00000524534 SIP14410 1827 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 B2RBV5 119 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 COPEO14579 308 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 RBP3P10745 1247 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 KCNA3P22001 575 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 CHRNA5P30532 468 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 GRM1Q13255 1194 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 KCNJ11Q14654 390 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 RBBP5Q15291 538 aaKnown RBP12□□□□□ -0.49
PTPRK-217ENST00000524534 GSTA3Q16772 222 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 TTC39BQ5VTQ0 682 aaPredicted RBP12□□□□□ -0.49
PTPRK-217ENST00000524534 DENND1BQ6P3S1 775 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 NET1Q7Z628 596 aaPredicted RBP12□□□□□ -0.49
PTPRK-217ENST00000524534 SLC26A11Q86WA9 606 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 WDR49Q8IV35 697 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 CMASQ8NFW8 434 aaPredicted RBP12□□□□□ -0.49
PTPRK-217ENST00000524534 TMEM134Q9H6X4 195 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 RNF146Q9NTX7 359 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 RIPK3Q9Y572 518 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 CTDP1Q9Y5B0 961 aaPredicted RBP12□□□□□ -0.49
PTPRK-217ENST00000524534 ANKRD33BA6NCL7 494 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 MCF2LO15068 1137 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 SUPT20HL2P0C7V6 817 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 POLR2BP30876 1174 aaKnown RBP12□□□□□ -0.49
PTPRK-217ENST00000524534 GCLCP48506 637 aaPredicted RBP12□□□□□ -0.49
PTPRK-217ENST00000524534 CACNA2D1P54289 1103 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 NRLP54845 237 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 YWHAGP61981 247 aaKnown RBP eCLIP12□□□□□ -0.49
PTPRK-217ENST00000524534 CDK18Q07002 472 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 SUPT20HL1Q3ZLR7 823 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 PRPF39Q86UA1 669 aaKnown RBP12□□□□□ -0.49
PTPRK-217ENST00000524534 RFX6Q8HWS3 928 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 TRIM42Q8IWZ5 723 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 RBM15BQ8NDT2 890 aaKnown RBP12□□□□□ -0.49
PTPRK-217ENST00000524534 FAM161BQ96MY7 647 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 TJP2Q9UDY2 1190 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 CYTH4Q9UIA0 394 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 ANGPTL2Q9UKU9 493 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 PLLPQ9Y342 182 aa12□□□□□ -0.49
PTPRK-217ENST00000524534 SEC23IPQ9Y6Y8 1000 aaKnown RBP12□□□□□ -0.49
PTPRK-217ENST00000524534 PSME4Q14997 1843 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 TRIM49D1C9J1S8 452 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 H3BRJ5 948 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 VWA5AO00534 786 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 FAM189A1O60320 539 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 RAD17O75943 681 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 STIP1P31948 543 aaKnown RBP11.99□□□□□ -0.49
PTPRK-217ENST00000524534 CPA2P48052 419 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 RAB27AP51159 221 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 YWHAEP62258 255 aaKnown RBP11.99□□□□□ -0.49
PTPRK-217ENST00000524534 SMYD5Q6GMV2 418 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 KCTD6Q8NC69 237 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 SMC1BQ8NDV3 1235 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 FBXO27Q8NI29 283 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 NR1H4Q96RI1 486 aaPredicted RBP11.99□□□□□ -0.49
PTPRK-217ENST00000524534 MTMR12Q9C0I1 747 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 LHX5Q9H2C1 402 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 ZNF180Q9UJW8 692 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 TTLL3Q9Y4R7 772 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 I3L4J1 428 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 CHADO15335 359 aa11.99□□□□□ -0.49
PTPRK-217ENST00000524534 TM7SF2O76062 418 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms