RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 CAPN9O14815 690 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 PQBP1O60828 265 aaKnown RBP10.45□□□□□ -0.74
VPS13B-212ENST00000524330 LRCH4O75427 683 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 TADA2AO75478 443 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 DAB1O75553 588 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 ZMYND10O75800 440 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 AP1G2O75843 785 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 GJB6O95452 261 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 ITIH2P19823 946 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 MIPP30301 263 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 YWHAHQ04917 246 aaPredicted RBP10.45□□□□□ -0.74
VPS13B-212ENST00000524330 NFE2Q16621 373 aaPredicted RBP10.45□□□□□ -0.74
VPS13B-212ENST00000524330 TIGD5Q53EQ6 642 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 INTS6LQ5JSJ4 861 aaKnown RBP10.45□□□□□ -0.74
VPS13B-212ENST00000524330 SPDYCQ5MJ68 293 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 C1orf53Q5VUE5 145 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 DRICH1Q6PGQ1 229 aaPredicted RBP10.45□□□□□ -0.74
VPS13B-212ENST00000524330 BZW1Q7L1Q6 419 aaKnown RBP10.45□□□□□ -0.74
VPS13B-212ENST00000524330 STRADAQ7RTN6 431 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 GSTA5Q7RTV2 222 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 ANKRD33Q7Z3H0 272 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 CTU1Q7Z7A3 348 aaKnown RBP10.45□□□□□ -0.74
VPS13B-212ENST00000524330 CROCCP2Q86T23 111 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 FAM35AQ86V20 835 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 PIGZQ86VD9 579 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 NPAS4Q8IUM7 802 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 SPATA2LQ8IUW3 424 aaPredicted RBP10.45□□□□□ -0.74
VPS13B-212ENST00000524330 PSTKQ8IV42 348 aaKnown RBP10.45□□□□□ -0.74
VPS13B-212ENST00000524330 MREGQ8N565 214 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 CASKIN2Q8WXE0 1202 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 IRGQQ8WZA9 623 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 FAM149B1Q96BN6 582 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 HAUS1Q96CS2 278 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 DCLK3Q9C098 648 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 HIPK3Q9H422 1215 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 PNPLA8Q9NP80 782 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 NGRNQ9NPE2 291 aaKnown RBP10.45□□□□□ -0.74
VPS13B-212ENST00000524330 KRT82Q9NSB4 513 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 RNF19AQ9NV58 838 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 NFU1Q9UMS0 254 aa10.45□□□□□ -0.74
VPS13B-212ENST00000524330 DRG1Q9Y295 367 aaKnown RBP10.45□□□□□ -0.74
VPS13B-212ENST00000524330 hCG_1818297A0A087WSY0 165 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 GOLGA6BA6NDN3 693 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 GOLGA6L10A6NI86 522 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 H7C4K7 107 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 ENPP3O14638 875 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 PAPSS1O43252 624 aaPredicted RBP10.44□□□□□ -0.74
VPS13B-212ENST00000524330 EFCAB14O75071 495 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 F9P00740 461 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 ALDH2P05091 517 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 ATF2P15336 505 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 KDELR1P24390 212 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 ACAT1P24752 427 aaKnown RBP10.44□□□□□ -0.74
VPS13B-212ENST00000524330 NOS2P35228 1153 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 ACTN2P35609 894 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 OR1G1P47890 313 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 ZNF135P52742 658 aaPredicted RBP10.44□□□□□ -0.74
VPS13B-212ENST00000524330 AIF1P55008 147 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 MRPS5P82675 430 aaKnown RBP10.44□□□□□ -0.74
VPS13B-212ENST00000524330 HTRA3P83110 453 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 OGDHQ02218 1023 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 SLC25A11Q02978 314 aaKnown RBP10.44□□□□□ -0.74
VPS13B-212ENST00000524330 ZNF252P-AS1Q0IIN9 211 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 SMARCB1Q12824 385 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 SLMAPQ14BN4 828 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 DUPD1Q68J44 220 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 SCYL2Q6P3W7 929 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 FBXO46Q6PJ61 603 aaPredicted RBP10.44□□□□□ -0.74
VPS13B-212ENST00000524330 TRAF7Q6Q0C0 670 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 SLC39A5Q6ZMH5 540 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 RFX6Q8HWS3 928 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 SCUBE3Q8IX30 993 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 FUKQ8N0W3 1084 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 SCML4Q8N228 414 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 TMEM130Q8N3G9 435 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 EMC1Q8N766 993 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 DBF4BQ8NFT6 615 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 CMASQ8NFW8 434 aaPredicted RBP10.44□□□□□ -0.74
VPS13B-212ENST00000524330 FAM172AQ8WUF8 416 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 HDAC7Q8WUI4 952 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 SEC14L1Q92503 715 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 FMO2Q99518 471 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 HEMGNQ9BXL5 484 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 FOXP3Q9BZS1 431 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 DMAP1Q9NPF5 467 aaPredicted RBP10.44□□□□□ -0.74
VPS13B-212ENST00000524330 ZNF446Q9NWS9 450 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 WBP1LQ9NX94 342 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 WHRNQ9P202 907 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 ASIC3Q9UHC3 531 aa10.44□□□□□ -0.74
VPS13B-212ENST00000524330 OR6C75A6NL08 312 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 SMAPO00193 183 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 MCF2LO15068 1137 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 MDM4O15151 490 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 DAPK3O43293 454 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 ARL4AP40617 200 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 MATKP42679 507 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 CDKN2BP42772 138 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 PTGIRP43119 386 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 CARSP49589 748 aaKnown RBP10.43□□□□□ -0.74
VPS13B-212ENST00000524330 TKTL1P51854 596 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms