RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 DDX6P26196 483 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLN8-207ENST00000524258 ANXA13P27216 316 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 KIF11P52732 1056 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 YWHAEP62258 255 aaKnown RBP12.65□□□□□ -0.38
CLN8-207ENST00000524258 FCHO2Q0JRZ9 810 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 TAF10Q12962 218 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 TAF12Q16514 161 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 RAB41Q5JT25 222 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 LCLAT1Q6UWP7 414 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 MFSD6LQ8IWD5 586 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 AOPEPQ8N6M6 819 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 MAB21L3Q8N8X9 362 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 RBBP8NLQ8NC74 664 aaPredicted RBP12.65□□□□□ -0.38
CLN8-207ENST00000524258 SHC3Q92529 594 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 USP13Q92995 863 aaPredicted RBP12.65□□□□□ -0.38
CLN8-207ENST00000524258 CYP2S1Q96SQ9 504 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 LRFN3Q9BTN0 628 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 RNF38Q9H0F5 515 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 SMG9Q9H0W8 520 aaKnown RBP12.65□□□□□ -0.38
CLN8-207ENST00000524258 ZFP14Q9HCL3 533 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 OBP2AQ9NY56 170 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 APEX2Q9UBZ4 518 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 KIAA1257Q9ULG3 409 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 CCL26Q9Y258 94 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 PCDHB4Q9Y5E5 795 aa12.65□□□□□ -0.38
CLN8-207ENST00000524258 ANAPC1Q9H1A4 1944 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 OBSL1O75147 1896 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 SYCE3A1L190 88 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 RTN3O95197 1032 aaPredicted RBP12.64□□□□□ -0.39
CLN8-207ENST00000524258 LETM1O95202 739 aaPredicted RBP12.64□□□□□ -0.39
CLN8-207ENST00000524258 OAS1P00973 400 aaKnown RBP12.64□□□□□ -0.39
CLN8-207ENST00000524258 PRKCSHP14314 528 aaPredicted RBP12.64□□□□□ -0.39
CLN8-207ENST00000524258 PTMSP20962 102 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 YWHAQP27348 245 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 COPB1P53618 953 aaKnown RBP12.64□□□□□ -0.39
CLN8-207ENST00000524258 ZNF268Q14587 947 aaPredicted RBP12.64□□□□□ -0.39
CLN8-207ENST00000524258 CNGA2Q16280 664 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 ARHGAP15Q53QZ3 475 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 SGO2Q562F6 1265 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 KLHDC7AQ5VTJ3 777 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 HFE2Q6ZVN8 426 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 ENOSF1Q7L5Y1 443 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 BHLHA9Q7RTU4 235 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 OVCA2Q8WZ82 227 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 MRPS31Q92665 395 aaKnown RBP12.64□□□□□ -0.39
CLN8-207ENST00000524258 C1QTNF1Q9BXJ1 281 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 GANQ9H2C0 597 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 ACP6Q9NPH0 428 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 OSER1Q9NX31 292 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 WNT16Q9UBV4 365 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 CHORDC1Q9UHD1 332 aaPredicted RBP12.64□□□□□ -0.39
CLN8-207ENST00000524258 ZMYM5Q9UJ78 669 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 TSPAN16Q9UKR8 245 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.64□□□□□ -0.39
CLN8-207ENST00000524258 SCML2Q9UQR0 700 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 SIK3Q9Y2K2 1263 aa12.64□□□□□ -0.39
CLN8-207ENST00000524258 ZNF638Q14966 1978 aaKnown RBP12.63□□□□□ -0.39
CLN8-207ENST00000524258 ZNF318Q5VUA4 2279 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 CFHP08603 1231 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 TCF3P15923 654 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 PFKLP17858 780 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 PSMC3P17980 439 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 BRD2P25440 801 aaKnown RBP12.63□□□□□ -0.39
CLN8-207ENST00000524258 PPP3CCP48454 512 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 RPL34P49207 117 aaKnown RBP12.63□□□□□ -0.39
CLN8-207ENST00000524258 KLK7P49862 253 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 PDE4CQ08493 712 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 GRM2Q14416 872 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 GOLGA7BQ2TAP0 167 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 ZSCAN23Q3MJ62 389 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 SCD5Q86SK9 330 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 PIGZQ86VD9 579 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 ARL14EPQ8N8R7 260 aaPredicted RBP12.63□□□□□ -0.39
CLN8-207ENST00000524258 DEPDC1BQ8WUY9 529 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 SLC35F5Q8WV83 523 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 E2F7Q96AV8 911 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 ZFRQ96KR1 1074 aaKnown RBP12.63□□□□□ -0.39
CLN8-207ENST00000524258 VPS16Q9H269 839 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 SLITRK6Q9H5Y7 841 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 NMUR1Q9HB89 426 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 PLCB1Q9NQ66 1216 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 TRPV5Q9NQA5 729 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 TRPM5Q9NZQ8 1165 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 GMIPQ9P107 970 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 DNAJC12Q9UKB3 198 aa12.63□□□□□ -0.39
CLN8-207ENST00000524258 PATJQ8NI35 1801 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 LGALS16A8MUM7 142 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 PRR33A8MZF0 331 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 FOXN3O00409 490 aaPredicted RBP12.62□□□□□ -0.39
CLN8-207ENST00000524258 XPO1O14980 1071 aaKnown RBP12.62□□□□□ -0.39
CLN8-207ENST00000524258 EPHB6O15197 1021 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 CD19P15391 556 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 CLCN1P35523 988 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 ZNF165P49910 485 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 MFAP3P55082 362 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 SLC7A9P82251 487 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 USP4Q13107 963 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 NFKBIBQ15653 356 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 ZNF77Q15935 545 aa12.62□□□□□ -0.39
CLN8-207ENST00000524258 SKOR2Q2VWA4 1001 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms