RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 RAD23BP54727 409 aa23.56■■□□□ 1.36
NKX6-3-202ENST00000524115 STILQ15468 1287 aa23.56■■□□□ 1.36
NKX6-3-202ENST00000524115 ATP13A4Q4VNC1 1196 aa23.56■■□□□ 1.36
NKX6-3-202ENST00000524115 RNASEH2BQ5TBB1 312 aaKnown RBP23.56■■□□□ 1.36
NKX6-3-202ENST00000524115 SCARA5Q6ZMJ2 495 aa23.56■■□□□ 1.36
NKX6-3-202ENST00000524115 NCAPGQ9BPX3 1015 aa23.56■■□□□ 1.36
NKX6-3-202ENST00000524115 UBE2OQ9C0C9 1292 aaKnown RBP23.56■■□□□ 1.36
NKX6-3-202ENST00000524115 ASNSD1Q9NWL6 643 aa23.56■■□□□ 1.36
NKX6-3-202ENST00000524115 NXF1Q9UBU9 619 aaKnown RBP23.56■■□□□ 1.36
NKX6-3-202ENST00000524115 C22orf31O95567 290 aa23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 KRT19P08727 400 aa23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 IFNAR2P48551 515 aa23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 PLCB3Q01970 1234 aa23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 SLC25A11Q02978 314 aaKnown RBP23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 PTPN11Q06124 597 aaPredicted RBP23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 XRCC4Q13426 336 aa23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 PTPN20Q4JDL3 420 aa23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 TRPM8Q7Z2W7 1104 aa23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 ANKRD33Q7Z3H0 272 aa23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 APBB1IPQ7Z5R6 666 aaPredicted RBP23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 PPIL6Q8IXY8 311 aa23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 TMEM176AQ96HP8 235 aa23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 C9orf72Q96LT7 481 aa23.55■■□□□ 1.36
NKX6-3-202ENST00000524115 TRIM43BA6NCK2 446 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 CFAP73A6NFT4 308 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 SGK1O00141 431 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 RASSF9O75901 435 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 STAG3L1P0CL83 205 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 PCK1P35558 622 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 WDR72Q3MJ13 1102 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 FBXW10Q5XX13 1052 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 EEF1DP3Q658K8 133 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 CXCL17Q6UXB2 119 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 TRIM50Q86XT4 487 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 MAML1Q92585 1016 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 TRIM43Q96BQ3 446 aaPredicted RBP23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 MCRS1Q96EZ8 462 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 TOX2Q96NM4 488 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 KLHL11Q9NVR0 708 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 MCM3APO60318 1980 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 FAM47DPA6NHR8 397 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 C3orf70A6NLC5 250 aaPredicted RBP23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 PRPF4O43172 522 aaKnown RBP eCLIP23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 CILPO75339 1184 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 OAS1P00973 400 aaKnown RBP23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 PECAM1P16284 738 aaPredicted RBP23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 KDELR1P24390 212 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 RFC1P35251 1148 aaPredicted RBP23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 CDK7P50613 346 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 ARL4CP56559 192 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 MYO1EQ12965 1108 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 CYP4A22Q5TCH4 519 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 ICE2Q659A1 982 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 XYLT1Q86Y38 959 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 SSU72Q9NP77 194 aaKnown RBP23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 DNAJC17Q9NVM6 304 aaKnown RBP23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 SIX4Q9UIU6 781 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 ITGA11Q9UKX5 1188 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 POLIQ9UNA4 740 aa23.54■■□□□ 1.36
NKX6-3-202ENST00000524115 TCP11X1B4DZS4 312 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 RASA4BC9J798 803 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 GOLGA8SH3BPF8 625 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 RASA4O43374 803 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 LRCH4O75427 683 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 CLTBP09497 229 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 CXCL8P10145 99 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 DESP17661 470 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 SNX16P57768 344 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 C1orf127Q8N9H9 656 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 CMASQ8NFW8 434 aaPredicted RBP23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 RSAD2Q8WXG1 361 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 FAM118BQ9BPY3 351 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 RSAD1Q9HA92 442 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 SLC40A1Q9NP59 571 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 KLC4Q9NSK0 619 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 HAUS2Q9NVX0 235 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 ARL2BPQ9Y2Y0 163 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 C2CD2Q9Y426 696 aa23.53■■□□□ 1.36
NKX6-3-202ENST00000524115 LACTBL1A8MY62 500 aa23.52■■□□□ 1.36
NKX6-3-202ENST00000524115 CABYRO75952 493 aa23.52■■□□□ 1.36
NKX6-3-202ENST00000524115 GH1P01241 217 aa23.52■■□□□ 1.36
NKX6-3-202ENST00000524115 TCF4P15884 667 aa23.52■■□□□ 1.36
NKX6-3-202ENST00000524115 RBP5P82980 135 aa23.52■■□□□ 1.36
NKX6-3-202ENST00000524115 ZC3H12AQ5D1E8 599 aaKnown RBP23.52■■□□□ 1.36
NKX6-3-202ENST00000524115 ANKRD42Q8N9B4 389 aa23.52■■□□□ 1.36
NKX6-3-202ENST00000524115 SLC4A11Q8NBS3 891 aa23.52■■□□□ 1.36
NKX6-3-202ENST00000524115 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.52■■□□□ 1.36
NKX6-3-202ENST00000524115 ARVCFO00192 962 aa23.51■■□□□ 1.35
NKX6-3-202ENST00000524115 B4GALT5O43286 388 aa23.51■■□□□ 1.35
NKX6-3-202ENST00000524115 CLCN3P51790 818 aa23.51■■□□□ 1.35
NKX6-3-202ENST00000524115 PPARDQ03181 441 aa23.51■■□□□ 1.35
NKX6-3-202ENST00000524115 FAAP100Q0VG06 881 aa23.51■■□□□ 1.35
NKX6-3-202ENST00000524115 TFDP2Q14188 446 aa23.51■■□□□ 1.35
NKX6-3-202ENST00000524115 HIF1AQ16665 826 aa23.51■■□□□ 1.35
NKX6-3-202ENST00000524115 FAM47CQ5HY64 1035 aa23.51■■□□□ 1.35
NKX6-3-202ENST00000524115 TRABD2AQ86V40 505 aa23.51■■□□□ 1.35
NKX6-3-202ENST00000524115 SRRM1Q8IYB3 904 aaKnown RBP23.51■■□□□ 1.35
NKX6-3-202ENST00000524115 TDHQ8IZJ6 230 aa23.51■■□□□ 1.35
NKX6-3-202ENST00000524115 KCTD6Q8NC69 237 aa23.51■■□□□ 1.35
NKX6-3-202ENST00000524115 AFG1LQ8WV93 481 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms