RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 ANKRD52Q8NB46 1076 aa13.24□□□□□ -0.29
CCNC-216ENST00000523961 SCAMP5Q8TAC9 235 aa13.24□□□□□ -0.29
CCNC-216ENST00000523961 PLA2G2FQ9BZM2 168 aa13.24□□□□□ -0.29
CCNC-216ENST00000523961 UBXN6Q9BZV1 441 aa13.24□□□□□ -0.29
CCNC-216ENST00000523961 VPS16Q9H269 839 aa13.24□□□□□ -0.29
CCNC-216ENST00000523961 TRPC7Q9HCX4 862 aa13.24□□□□□ -0.29
CCNC-216ENST00000523961 SLC2A4RGQ9NR83 387 aa13.24□□□□□ -0.29
CCNC-216ENST00000523961 LIMA1Q9UHB6 759 aaKnown RBP13.24□□□□□ -0.29
CCNC-216ENST00000523961 CNTN6Q9UQ52 1028 aa13.24□□□□□ -0.29
CCNC-216ENST00000523961 NCANO14594 1321 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 TRAV19A0A0A6YYK7 116 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 FAM92AA1XBS5 289 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 ZNF840PA6NDX5 716 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 TMEM221A6NGB7 291 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 HEPACAM2A8MVW5 462 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 HHLA1C9JL84 531 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 RNF225M0QZC1 329 aaPredicted RBP13.23□□□□□ -0.29
CCNC-216ENST00000523961 M0R296 226 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 O00370 1275 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 ZNF18P17022 549 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 PSMC3P17980 439 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 ZNF132P52740 706 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 COPB1P53618 953 aaKnown RBP13.23□□□□□ -0.29
CCNC-216ENST00000523961 BCAT1P54687 386 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 GPC5P78333 572 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 PFKPQ01813 784 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 CNGA2Q16280 664 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 ARHGAP44Q17R89 818 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 GOLGA7BQ2TAP0 167 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 FKBP15Q5T1M5 1219 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 GJB7Q6PEY0 223 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 VITQ6UXI7 678 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 MFSD6LQ8IWD5 586 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 CELF5Q8N6W0 485 aaKnown RBP13.23□□□□□ -0.29
CCNC-216ENST00000523961 TRMT61BQ9BVS5 477 aaKnown RBP13.23□□□□□ -0.29
CCNC-216ENST00000523961 KIF9Q9HAQ2 790 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 SIX2Q9NPC8 291 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 WNT16Q9UBV4 365 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 TSPAN16Q9UKR8 245 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 FBXL21Q9UKT6 434 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 GREB1Q4ZG55 1949 aa13.23□□□□□ -0.29
CCNC-216ENST00000523961 C2orf78A6NCI8 922 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 FAM86C2PA6NEL3 165 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 LRRC10BA6NIK2 292 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 BECN2A8MW95 431 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 PRR33A8MZF0 331 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 PRAMEF12O95522 483 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 CAVIN2O95810 425 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 ABL1P00519 1130 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 CKMP06732 381 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 CFHP08603 1231 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 USP17L7P0C7H9 530 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 HDCP19113 662 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 RFX1P22670 979 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 KIF11P52732 1056 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 APBA1Q02410 837 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 BST2Q10589 180 aaKnown RBP13.22□□□□□ -0.29
CCNC-216ENST00000523961 KCNMA1Q12791 1236 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 GRM2Q14416 872 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 ZNF268Q14587 947 aaPredicted RBP13.22□□□□□ -0.29
CCNC-216ENST00000523961 ZSCAN23Q3MJ62 389 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 LCLAT1Q6UWP7 414 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 GPRIN1Q7Z2K8 1008 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 BMP8AQ7Z5Y6 402 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 TTC30AQ86WT1 665 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 GPIHBP1Q8IV16 184 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 DHX40Q8IX18 779 aaKnown RBP13.22□□□□□ -0.29
CCNC-216ENST00000523961 YAF2Q8IY57 180 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 BPIFB1Q8TDL5 484 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 TFAP2BQ92481 460 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 SHC3Q92529 594 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 RSPRY1Q96DX4 576 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 ASIC4Q96FT7 647 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 HSD3B7Q9H2F3 369 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 BRD9Q9H8M2 597 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 C11orf16Q9NQ32 467 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 TDP1Q9NUW8 608 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 DNAJC12Q9UKB3 198 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 SCML2Q9UQR0 700 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 TECTAO75443 2155 aa13.22□□□□□ -0.29
CCNC-216ENST00000523961 MYH10P35580 1976 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 MUC3AQ02505 3323 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 LGALS16A8MUM7 142 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 ZNF263O14978 683 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 XPO1O14980 1071 aaKnown RBP13.21□□□□□ -0.29
CCNC-216ENST00000523961 ZDHHC11BP0C7U3 371 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 SETSIPP0DME0 302 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 BRD2P25440 801 aaKnown RBP13.21□□□□□ -0.29
CCNC-216ENST00000523961 GDI1P31150 447 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 USP8P40818 1118 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 PDE4CQ08493 712 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 FCHO2Q0JRZ9 810 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 KLHDC7AQ5VTJ3 777 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 SNX30Q5VWJ9 437 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 DPY19L2P1Q6NXN4 242 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 PIGZQ86VD9 579 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 ARL14EPQ8N8R7 260 aaPredicted RBP13.21□□□□□ -0.29
CCNC-216ENST00000523961 DNASE1L2Q92874 299 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 IRF7Q92985 503 aa13.21□□□□□ -0.29
CCNC-216ENST00000523961 USP13Q92995 863 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms