RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 ZBTB44Q8NCP5 570 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 CCDC150Q8NCX0 1101 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 PDZD8Q8NEN9 1154 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 SPATA20Q8TB22 786 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 TAS1R2Q8TE23 839 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 ATP2A3Q93084 1043 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 SMARCE1Q969G3 411 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 KCNK16Q96T55 309 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 TSG101Q99816 390 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 TMEM8AQ9HCN3 771 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 PCDHA5Q9Y5H7 936 aa17.23■□□□□ 0.35
CLN8-206ENST00000523237 OTOL1A6NHN0 477 aaPredicted RBP17.22■□□□□ 0.35
CLN8-206ENST00000523237 STX10O60499 249 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 AP1G2O75843 785 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 GRSF1Q12849 480 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLN8-206ENST00000523237 GAS6Q14393 721 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 WDR44Q5JSH3 913 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 KRT39Q6A163 491 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 FUKQ8N0W3 1084 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 OVCA2Q8WZ82 227 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 FBXO32Q969P5 355 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 EXOC4Q96A65 974 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 EEF2KMTQ96G04 330 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 NIF3L1Q9GZT8 377 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 CYP3A43Q9HB55 503 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLN8-206ENST00000523237 KRT82Q9NSB4 513 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 HMGXB4Q9UGU5 601 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 WNT6Q9Y6F9 365 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 FAM186AA6NE01 2351 aa17.22■□□□□ 0.35
CLN8-206ENST00000523237 RIF1Q5UIP0 2472 aaKnown RBP17.21■□□□□ 0.35
CLN8-206ENST00000523237 MYO16Q9Y6X6 1858 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 TRDMT1O14717 391 aaKnown RBP17.21■□□□□ 0.35
CLN8-206ENST00000523237 LILRB5O75023 590 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 OAS1P00973 400 aaKnown RBP17.21■□□□□ 0.35
CLN8-206ENST00000523237 TDGF1P13385 188 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 SLC5A3P53794 718 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 MCCD1P59942 119 aaPredicted RBP17.21■□□□□ 0.35
CLN8-206ENST00000523237 SLC7A9P82251 487 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 SATB1Q01826 763 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 INCA1Q0VD86 236 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 ORC1Q13415 861 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 TMEM196Q5HYL7 178 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 Q6ZS52 159 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 SLC2A14Q8TDB8 520 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 ERCC4Q92889 916 aaPredicted RBP17.21■□□□□ 0.35
CLN8-206ENST00000523237 DNAI2Q9GZS0 605 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 RNF38Q9H0F5 515 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 ECT2Q9H8V3 914 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 APOBEC3GQ9HC16 384 aaKnown RBP17.21■□□□□ 0.35
CLN8-206ENST00000523237 FAM49BQ9NUQ9 324 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 COMMD8Q9NX08 183 aa17.21■□□□□ 0.35
CLN8-206ENST00000523237 DMDP11532 3685 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 LEFTY2O00292 366 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 TNFRSF10BO14763 440 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 SLC16A3O15427 465 aaKnown RBP17.2■□□□□ 0.34
CLN8-206ENST00000523237 OLFM2O95897 454 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 CCDC130P13994 396 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 GJA4P35212 333 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 MXI1P50539 228 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 FKBP3Q00688 224 aaKnown RBP17.2■□□□□ 0.34
CLN8-206ENST00000523237 NR1H3Q13133 447 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 EML3Q32P44 896 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 ELOA2Q8IYF1 753 aaPredicted RBP17.2■□□□□ 0.34
CLN8-206ENST00000523237 KIAA1958Q8N8K9 716 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 SUMF1Q8NBK3 374 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 SCAMP5Q8TAC9 235 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 CHFRQ96EP1 664 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 FAXDC2Q96IV6 333 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 HINFPQ9BQA5 517 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 NT5C1AQ9BXI3 368 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 CSNK1G1Q9HCP0 422 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 CPQQ9Y646 472 aa17.2■□□□□ 0.34
CLN8-206ENST00000523237 CFAP54Q96N23 3096 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 PTPRZ1P23471 2315 aaPredicted RBP17.19■□□□□ 0.34
CLN8-206ENST00000523237 PAPSS2O95340 614 aaPredicted RBP17.19■□□□□ 0.34
CLN8-206ENST00000523237 NFATC1O95644 943 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 FAM200BP0CF97 657 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 CD58P19256 250 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 ZXDBP98169 803 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 LRRC63Q05C16 580 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 STIM1Q13586 685 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 ANKRD40Q6AI12 368 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 FSTL4Q6MZW2 842 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 DDX42Q86XP3 938 aaKnown RBP eCLIP17.19■□□□□ 0.34
CLN8-206ENST00000523237 C12orf29Q8N999 325 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 FBXL13Q8NEE6 735 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 RUBCNQ92622 972 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 SMOQ99835 787 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 P2RY13Q9BPV8 354 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 EPC1Q9H2F5 836 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 FBXO44Q9H4M3 255 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 SMPD4Q9NXE4 827 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 IL37Q9NZH6 218 aa17.19■□□□□ 0.34
CLN8-206ENST00000523237 CHORDC1Q9UHD1 332 aaPredicted RBP17.19■□□□□ 0.34
CLN8-206ENST00000523237 PSMA7O14818 248 aa17.18■□□□□ 0.34
CLN8-206ENST00000523237 CILPO75339 1184 aa17.18■□□□□ 0.34
CLN8-206ENST00000523237 BEST1O76090 585 aa17.18■□□□□ 0.34
CLN8-206ENST00000523237 MBL2P11226 248 aaPredicted RBP17.18■□□□□ 0.34
CLN8-206ENST00000523237 DRD1P21728 446 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms