RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 ATICP31939 592 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 GCLMP48507 274 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 AP3M2P53677 418 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 LRRC32Q14392 662 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 VEPH1Q14D04 833 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 EDRF1Q3B7T1 1238 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 MDH1BQ5I0G3 518 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 ANKRD40Q6AI12 368 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 PSAPL1Q6NUJ1 521 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 PKN3Q6P5Z2 889 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 KBTBD6Q86V97 674 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 SPATA2LQ8IUW3 424 aaPredicted RBP16.08■□□□□ 0.16
PCM1-218ENST00000523055 MSANTD3Q96H12 275 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 PCED1BQ96HM7 432 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 LRRC3BQ96PB8 259 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 ATXN3LQ9H3M9 355 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 VRTNQ9H8Y1 702 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 CDH9Q9ULB4 789 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 EML5Q05BV3 1969 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 BIN1O00499 593 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 TOP3BO95985 862 aaKnown RBP16.07■□□□□ 0.16
PCM1-218ENST00000523055 SPINK2P20155 84 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 RPL13P26373 211 aaKnown RBP16.07■□□□□ 0.16
PCM1-218ENST00000523055 PSMC2P35998 433 aaKnown RBP16.07■□□□□ 0.16
PCM1-218ENST00000523055 GNL1P36915 607 aaPredicted RBP16.07■□□□□ 0.16
PCM1-218ENST00000523055 PIK3CAP42336 1068 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 CYP27A1Q02318 531 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 FCHO2Q0JRZ9 810 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 CFAP221Q4G0U5 840 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 COBLL1Q53SF7 1204 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 ZNF667Q5HYK9 610 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 INTS8Q75QN2 995 aaKnown RBP16.07■□□□□ 0.16
PCM1-218ENST00000523055 TMEM150AQ86TG1 271 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 ITIH5Q86UX2 942 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 TAS1R2Q8TE23 839 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 GAB3Q8WWW8 586 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 SNX25Q9H3E2 840 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 ABCB6Q9NP58 842 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 TMEM30AQ9NV96 361 aa16.07■□□□□ 0.16
PCM1-218ENST00000523055 MAGED2Q9UNF1 606 aaPredicted RBP16.07■□□□□ 0.16
PCM1-218ENST00000523055 FREM2Q5SZK8 3169 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 NBEAQ8NFP9 2946 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 A8MXQ7 604 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 SPECC1L-ADORA2AF8WAN1 911 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 IKBKBO14920 756 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 CHADO15335 359 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 ASS1P00966 412 aaKnown RBP16.06■□□□□ 0.16
PCM1-218ENST00000523055 BDNFP23560 247 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 CTHP32929 405 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 PXNP49023 591 aaPredicted RBP16.06■□□□□ 0.16
PCM1-218ENST00000523055 CACNA2D1P54289 1103 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 ORC1Q13415 861 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 DGKKQ5KSL6 1271 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 GPR158Q5T848 1215 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 TCEAL6Q6IPX3 200 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 SCN4BQ8IWT1 228 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 TCEAL3Q969E4 200 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 C8orf33Q9H7E9 229 aaPredicted RBP16.06■□□□□ 0.16
PCM1-218ENST00000523055 HMGXB4Q9UGU5 601 aa16.06■□□□□ 0.16
PCM1-218ENST00000523055 HOOK1Q9UJC3 728 aaKnown RBP16.06■□□□□ 0.16
PCM1-218ENST00000523055 ATG2BQ96BY7 2078 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 CLDN5O00501 218 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 TADA3O75528 432 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 PRAMEF12O95522 483 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 KRT13P13646 458 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 ASPAP45381 313 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 UBE2HP62256 183 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 TAF12Q16514 161 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 KLHL10Q6JEL2 608 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 C1orf228Q6PIY5 440 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 CACNA2D4Q7Z3S7 1137 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 ZC3H3Q8IXZ2 948 aaKnown RBP16.05■□□□□ 0.16
PCM1-218ENST00000523055 ELOA2Q8IYF1 753 aaPredicted RBP16.05■□□□□ 0.16
PCM1-218ENST00000523055 B3GALNT2Q8NCR0 500 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 MYCBPAPQ8TBZ2 947 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 GATA6Q92908 595 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 FUBP3Q96I24 572 aaKnown RBP eCLIP16.05■□□□□ 0.16
PCM1-218ENST00000523055 SMG9Q9H0W8 520 aaKnown RBP16.05■□□□□ 0.16
PCM1-218ENST00000523055 APOBEC3GQ9HC16 384 aaKnown RBP16.05■□□□□ 0.16
PCM1-218ENST00000523055 GTSE1Q9NYZ3 720 aa16.05■□□□□ 0.16
PCM1-218ENST00000523055 MAGEC2Q9UBF1 373 aaPredicted RBP16.05■□□□□ 0.16
PCM1-218ENST00000523055 CCDC163A0A0D9SF12 145 aa16.04■□□□□ 0.16
PCM1-218ENST00000523055 SRRM3A6NNA2 597 aaPredicted RBP16.04■□□□□ 0.16
PCM1-218ENST00000523055 CETN3O15182 167 aa16.04■□□□□ 0.16
PCM1-218ENST00000523055 RPP40O75818 363 aaKnown RBP16.04■□□□□ 0.16
PCM1-218ENST00000523055 F11P03951 625 aa16.04■□□□□ 0.16
PCM1-218ENST00000523055 PTPN1P18031 435 aaKnown RBP16.04■□□□□ 0.16
PCM1-218ENST00000523055 MPLP40238 635 aa16.04■□□□□ 0.16
PCM1-218ENST00000523055 NLRP12P59046 1061 aa16.04■□□□□ 0.16
PCM1-218ENST00000523055 NOP14P78316 857 aaKnown RBP16.04■□□□□ 0.16
PCM1-218ENST00000523055 MORC3Q14149 939 aa16.04■□□□□ 0.16
PCM1-218ENST00000523055 PON2Q15165 354 aa16.04■□□□□ 0.16
PCM1-218ENST00000523055 CAMK4Q16566 473 aa16.04■□□□□ 0.16
PCM1-218ENST00000523055 SGSM1Q2NKQ1 1148 aa16.04■□□□□ 0.16
PCM1-218ENST00000523055 C4orf50Q6ZRC1 276 aa16.04■□□□□ 0.16
PCM1-218ENST00000523055 RALGPS2Q86X27 583 aaPredicted RBP16.04■□□□□ 0.16
PCM1-218ENST00000523055 ARID3BQ8IVW6 561 aaPredicted RBP16.04■□□□□ 0.16
PCM1-218ENST00000523055 TTC8Q8TAM2 541 aa16.04■□□□□ 0.16
PCM1-218ENST00000523055 CSGALNACT1Q8TDX6 532 aa16.04■□□□□ 0.16
PCM1-218ENST00000523055 SEMA4DQ92854 862 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms