RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 TBC1D14Q9P2M4 693 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 WASF3Q9UPY6 502 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 PTPRDP23468 1912 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 HELZP42694 1942 aaKnown RBP10.01□□□□□ -0.81
SDC2-207ENST00000522911 ZNF638Q14966 1978 aaKnown RBP10.01□□□□□ -0.81
SDC2-207ENST00000522911 SDK1Q7Z5N4 2213 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 UPK3BL1B0FP48 263 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.01□□□□□ -0.81
SDC2-207ENST00000522911 UPK3BL2E5RIL1 263 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 TGFB1I1O43294 461 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 HCRTO43612 131 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 ALDH1A2O94788 518 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 RTN3O95197 1032 aaPredicted RBP10.01□□□□□ -0.81
SDC2-207ENST00000522911 CEACAM1P13688 526 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 PTPN1P18031 435 aaKnown RBP10.01□□□□□ -0.81
SDC2-207ENST00000522911 ANXA13P27216 316 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 GNL1P36915 607 aaPredicted RBP10.01□□□□□ -0.81
SDC2-207ENST00000522911 GRIK1P39086 918 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 P2RY2P41231 377 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 TNFRSF4P43489 277 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 KIR2DL1P43626 348 aaPredicted RBP10.01□□□□□ -0.81
SDC2-207ENST00000522911 CDR1P51861 262 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 AP3M2P53677 418 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 CLDN10P78369 228 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 CYP24A1Q07973 514 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 DHCR24Q15392 516 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 PREPLQ4J6C6 727 aaPredicted RBP10.01□□□□□ -0.81
SDC2-207ENST00000522911 DAB2IPQ5VWQ8 1189 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 TDRD10Q5VZ19 366 aaKnown RBP10.01□□□□□ -0.81
SDC2-207ENST00000522911 PHTF2Q8N3S3 785 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 PNKPQ96T60 521 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 CGRRF1Q99675 332 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 C7orf25Q9BPX7 421 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 EDEM2Q9BV94 578 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 RNF38Q9H0F5 515 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 GZF1Q9H116 711 aaPredicted RBP10.01□□□□□ -0.81
SDC2-207ENST00000522911 XYLT2Q9H1B5 865 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 AGPAT3Q9NRZ7 376 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 MTMR6Q9Y217 621 aa10.01□□□□□ -0.81
SDC2-207ENST00000522911 FREM2Q5SZK8 3169 aa10□□□□□ -0.81
SDC2-207ENST00000522911 MYO16Q9Y6X6 1858 aa10□□□□□ -0.81
SDC2-207ENST00000522911 F8VP50 259 aa10□□□□□ -0.81
SDC2-207ENST00000522911 CDX4O14627 284 aaPredicted RBP10□□□□□ -0.81
SDC2-207ENST00000522911 TNFRSF10BO14763 440 aa10□□□□□ -0.81
SDC2-207ENST00000522911 HOXC11O43248 304 aaPredicted RBP10□□□□□ -0.81
SDC2-207ENST00000522911 ADH1CP00326 375 aa10□□□□□ -0.81
SDC2-207ENST00000522911 CST3P01034 146 aaPredicted RBP10□□□□□ -0.81
SDC2-207ENST00000522911 PROS1P07225 676 aa10□□□□□ -0.81
SDC2-207ENST00000522911 ZDHHC11BP0C7U3 371 aa10□□□□□ -0.81
SDC2-207ENST00000522911 GRIA2P42262 883 aa10□□□□□ -0.81
SDC2-207ENST00000522911 PSMC1P62191 440 aaKnown RBP10□□□□□ -0.81
SDC2-207ENST00000522911 CREB5Q02930 508 aa10□□□□□ -0.81
SDC2-207ENST00000522911 TAF10Q12962 218 aa10□□□□□ -0.81
SDC2-207ENST00000522911 BYSLQ13895 437 aaKnown RBP10□□□□□ -0.81
SDC2-207ENST00000522911 CCDC6Q16204 474 aa10□□□□□ -0.81
SDC2-207ENST00000522911 FAM26FQ5R3K3 315 aa10□□□□□ -0.81
SDC2-207ENST00000522911 LMBRD2Q68DH5 695 aaPredicted RBP10□□□□□ -0.81
SDC2-207ENST00000522911 RHBDF2Q6PJF5 856 aa10□□□□□ -0.81
SDC2-207ENST00000522911 FILIP1Q7Z7B0 1213 aa10□□□□□ -0.81
SDC2-207ENST00000522911 ETFBKMTQ8IXQ9 262 aa10□□□□□ -0.81
SDC2-207ENST00000522911 NUP93Q8N1F7 819 aa10□□□□□ -0.81
SDC2-207ENST00000522911 IQUBQ8NA54 791 aa10□□□□□ -0.81
SDC2-207ENST00000522911 IL17RCQ8NAC3 791 aa10□□□□□ -0.81
SDC2-207ENST00000522911 XXYLT1Q8NBI6 393 aa10□□□□□ -0.81
SDC2-207ENST00000522911 B3GALNT2Q8NCR0 500 aa10□□□□□ -0.81
SDC2-207ENST00000522911 GLIS3Q8NEA6 775 aa10□□□□□ -0.81
SDC2-207ENST00000522911 MDGA1Q8NFP4 955 aa10□□□□□ -0.81
SDC2-207ENST00000522911 SYAP1Q96A49 352 aaPredicted RBP10□□□□□ -0.81
SDC2-207ENST00000522911 ZFRQ96KR1 1074 aaKnown RBP10□□□□□ -0.81
SDC2-207ENST00000522911 FNBP1Q96RU3 617 aa10□□□□□ -0.81
SDC2-207ENST00000522911 MMS19Q96T76 1030 aa10□□□□□ -0.81
SDC2-207ENST00000522911 SNX25Q9H3E2 840 aa10□□□□□ -0.81
SDC2-207ENST00000522911 TMEM9BQ9NQ34 198 aa10□□□□□ -0.81
SDC2-207ENST00000522911 TMEM30AQ9NV96 361 aa10□□□□□ -0.81
SDC2-207ENST00000522911 POLR3BQ9NW08 1133 aaPredicted RBP10□□□□□ -0.81
SDC2-207ENST00000522911 STARD13Q9Y3M8 1113 aa10□□□□□ -0.81
SDC2-207ENST00000522911 NME7Q9Y5B8 376 aa10□□□□□ -0.81
SDC2-207ENST00000522911 CPQQ9Y646 472 aa10□□□□□ -0.81
SDC2-207ENST00000522911 LAMA5O15230 3695 aa10□□□□□ -0.81
SDC2-207ENST00000522911 DMXL2Q8TDJ6 3036 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 PVALEFA0A1B0GWK0 134 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 TMEM8BA6NDV4 472 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 KHNYNO15037 678 aaKnown RBP9.99□□□□□ -0.81
SDC2-207ENST00000522911 DCLK1O15075 740 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 STX6O43752 255 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 KAT7O95251 611 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 YEATS4O95619 227 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 PDGFRBP09619 1106 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 TNNI1P19237 187 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 YWHAQP27348 245 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 TNNC1P63316 161 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 CYP27A1Q02318 531 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 LMAN2Q12907 356 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 WDR72Q3MJ13 1102 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 MDH1BQ5I0G3 518 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 EOGTQ5NDL2 527 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 TCEAL6Q6IPX3 200 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 FAM173BQ6P4H8 233 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 TMEM92Q6UXU6 159 aa9.99□□□□□ -0.81
SDC2-207ENST00000522911 UNC13DQ70J99 1090 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms