RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 TMEM196Q5HYL7 178 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 ACOT1Q86TX2 421 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 TTC30AQ86WT1 665 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 NUP93Q8N1F7 819 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 CD101Q93033 1021 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 EXOC4Q96A65 974 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 C8orf48Q96LL4 319 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 SLITRK1Q96PX8 696 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 ELOVL4Q9GZR5 314 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 GDPD2Q9HCC8 539 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 DMAC2Q9NW81 257 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 USP25Q9UHP3 1055 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 FRMD4BQ9Y2L6 1034 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 CPQQ9Y646 472 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 PATJQ8NI35 1801 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 ATP8B3O60423 1300 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 PDXKO00764 312 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 VNN1O95497 513 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 FAM163BP0C2L3 166 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 CCDC192P0DO97 292 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 MBL2P11226 248 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 P4HA1P13674 534 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 DRD1P21728 446 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 YWHAQP27348 245 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 PIK3CAP42336 1068 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 FOXK2Q01167 660 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 CCDC6Q16204 474 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 EML3Q32P44 896 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 C2orf27AQ580R0 203 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 LAIR1Q6GTX8 287 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 SPOPLQ6IQ16 392 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 ERMP1Q7Z2K6 904 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 FILIP1Q7Z7B0 1213 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 GPR161Q8N6U8 529 aaKnown RBP10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 RPLP0P6Q8NHW5 317 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 SCAMP5Q8TAC9 235 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 FBXO32Q969P5 355 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 JAKMIP2Q96AA8 810 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 TNIP3Q96KP6 325 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 HHIPQ96QV1 700 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 SDCBP2Q9H190 292 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 KCTD10Q9H3F6 313 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 PARD6AQ9NPB6 346 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 TMEM30AQ9NV96 361 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 CHMP5Q9NZZ3 219 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 CFAP97Q9P2B7 532 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 ARHGAP26Q9UNA1 814 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 SPTBN2O15020 2390 aa10.88□□□□□ -0.67
CTNNA1-235ENST00000522730 NUP210Q8TEM1 1887 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 KIF26AQ9ULI4 1882 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 COL4A2P08572 1712 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 AP1G2O75843 785 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 KIF20AO95235 890 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 NFATC1O95644 943 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 STAU1O95793 577 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 HLA-DRAP01903 254 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 RETP07949 1114 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 TRIM49P0CI25 452 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 TRIM49CP0CI26 452 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 CCDC130P13994 396 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 ADORA2BP29275 332 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 CNR2P34972 360 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 PPP3CCP48454 512 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 VAMP7P51809 220 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 NDST1P52848 882 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 NOP14P78316 857 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 NUCB2P80303 420 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 ZXDBP98169 803 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 USP4Q13107 963 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 SV2AQ7L0J3 742 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 WDR5BQ86VZ2 330 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 SLC9A9Q8IVB4 645 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 FAM160A2Q8N612 972 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 C12orf29Q8N999 325 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 SLC2A14Q8TDB8 520 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 EEF2KMTQ96G04 330 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 TTLL2Q9BWV7 592 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 SCAND2PQ9GZW5 306 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 NACA2Q9H009 215 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 FAM49BQ9NUQ9 324 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 CDV3Q9UKY7 258 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 HPSEQ9Y251 543 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 INVSQ9Y283 1065 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 ATP6V1DQ9Y5K8 247 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 FANCMQ8IYD8 2048 aa10.87□□□□□ -0.67
CTNNA1-235ENST00000522730 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-235ENST00000522730 MED19A0JLT2 244 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-235ENST00000522730 DCDC2BA2VCK2 349 aa10.86□□□□□ -0.67
CTNNA1-235ENST00000522730 ANTXRLA6NF34 631 aa10.86□□□□□ -0.67
CTNNA1-235ENST00000522730 RPP40O75818 363 aaKnown RBP10.86□□□□□ -0.67
CTNNA1-235ENST00000522730 ZNF202O95125 648 aa10.86□□□□□ -0.67
CTNNA1-235ENST00000522730 RTN3O95197 1032 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-235ENST00000522730 PAPSS2O95340 614 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-235ENST00000522730 MYL1P05976 194 aa10.86□□□□□ -0.67
CTNNA1-235ENST00000522730 IRF1P10914 325 aa10.86□□□□□ -0.67
CTNNA1-235ENST00000522730 KRT13P13646 458 aa10.86□□□□□ -0.67
CTNNA1-235ENST00000522730 CD58P19256 250 aa10.86□□□□□ -0.67
CTNNA1-235ENST00000522730 NR2F2P24468 414 aa10.86□□□□□ -0.67
CTNNA1-235ENST00000522730 SLC6A11P48066 632 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms