RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ZNF334Q9HCZ1 680 aaPredicted RBP6.8□□□□□ -1.32
PABPC1-220ENST00000522658 TUFT1Q9NNX1 390 aa6.8□□□□□ -1.32
PABPC1-220ENST00000522658 SLC5A6Q9Y289 635 aa6.8□□□□□ -1.32
PABPC1-220ENST00000522658 INSL5Q9Y5Q6 135 aa6.8□□□□□ -1.32
PABPC1-220ENST00000522658 DMXL1Q9Y485 3027 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 FANCMQ8IYD8 2048 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 ARHGEF37A1IGU5 675 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 SLC38A8A6NNN8 435 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 HEPACAM2A8MVW5 462 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 CHURC1-FNTBB4DL54 471 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 I3L4J1 428 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 K7ERI5 159 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 XPOTO43592 962 aaKnown RBP6.79□□□□□ -1.32
PABPC1-220ENST00000522658 FGF19O95750 216 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 XRCC6P12956 609 aaKnown RBP eCLIP6.79□□□□□ -1.32
PABPC1-220ENST00000522658 ATF2P15336 505 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 MCM7P33993 719 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 BRCC3P46736 316 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 FNTBP49356 437 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 EPHB3P54753 998 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 EVCP57679 992 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 OSTNP61366 133 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 SATB1Q01826 763 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 SCRN1Q12765 414 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 FAM78AQ5JUQ0 283 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 DGKKQ5KSL6 1271 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 VITQ6UXI7 678 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 TCEAL8Q8IYN2 117 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 SPEM1Q8N4L4 309 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 ZSCAN18Q8TBC5 510 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-220ENST00000522658 KCNB2Q92953 911 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 WDR89Q96FK6 387 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-220ENST00000522658 BICD1Q96G01 975 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 ACAP3Q96P50 834 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 MRPL4Q9BYD3 311 aaKnown RBP6.79□□□□□ -1.32
PABPC1-220ENST00000522658 FZD8Q9H461 694 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 THG1LQ9NWX6 298 aaKnown RBP6.79□□□□□ -1.32
PABPC1-220ENST00000522658 CRIM1Q9NZV1 1036 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 ANKFY1Q9P2R3 1169 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 MAFFQ9ULX9 164 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 SLC8A2Q9UPR5 921 aa6.79□□□□□ -1.32
PABPC1-220ENST00000522658 EP300Q09472 2414 aaPredicted RBP6.78□□□□□ -1.32
PABPC1-220ENST00000522658 EPB41L2O43491 1005 aaKnown RBP6.78□□□□□ -1.32
PABPC1-220ENST00000522658 CPNE3O75131 537 aaKnown RBP6.78□□□□□ -1.32
PABPC1-220ENST00000522658 NEFLP07196 543 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 RPL9P32969 192 aaKnown RBP6.78□□□□□ -1.32
PABPC1-220ENST00000522658 CCT6AP40227 531 aaKnown RBP6.78□□□□□ -1.32
PABPC1-220ENST00000522658 AMPD2Q01433 879 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 YWHAHQ04917 246 aaPredicted RBP6.78□□□□□ -1.32
PABPC1-220ENST00000522658 KARSQ15046 597 aaKnown RBP6.78□□□□□ -1.32
PABPC1-220ENST00000522658 TEAD2Q15562 447 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 ELF2Q15723 593 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 NPY5RQ15761 445 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 UPP1Q16831 310 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 ARHGAP29Q52LW3 1261 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 RPS26P11Q5JNZ5 115 aaPredicted RBP6.78□□□□□ -1.32
PABPC1-220ENST00000522658 SLC8B1Q6J4K2 584 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 ITIH5Q86UX2 942 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 MFSD6LQ8IWD5 586 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 DIS3L2Q8IYB7 885 aaKnown RBP6.78□□□□□ -1.32
PABPC1-220ENST00000522658 GLIS3Q8NEA6 775 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 TCEAL4Q96EI5 215 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 PPP1R10Q96QC0 940 aaKnown RBP6.78□□□□□ -1.32
PABPC1-220ENST00000522658 HSD17B14Q9BPX1 270 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 KIFC3Q9BVG8 833 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 PLA2G2FQ9BZM2 168 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 TM6SF1Q9BZW5 370 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 CCDC86Q9H6F5 360 aaKnown RBP6.78□□□□□ -1.32
PABPC1-220ENST00000522658 PARD6AQ9NPB6 346 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 TRPV5Q9NQA5 729 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 KMT5AQ9NQR1 393 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 AFF4Q9UHB7 1163 aaKnown RBP6.78□□□□□ -1.32
PABPC1-220ENST00000522658 TPCN1Q9ULQ1 816 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 NOL7Q9UMY1 257 aaKnown RBP6.78□□□□□ -1.32
PABPC1-220ENST00000522658 YIPF1Q9Y548 306 aa6.78□□□□□ -1.32
PABPC1-220ENST00000522658 COL4A3Q01955 1670 aa6.77□□□□□ -1.32
PABPC1-220ENST00000522658 DNAH14Q0VDD8 3507 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 A0A087WWV3 80 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 SMIM28A0A1B0GU29 152 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 SPECC1L-ADORA2AF8WAN1 911 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 CHADO15335 359 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 ATG13O75143 517 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 RPP40O75818 363 aaKnown RBP6.77□□□□□ -1.33
PABPC1-220ENST00000522658 OR52Z1P0C646 297 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 ODC1P11926 461 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 GJA1P17302 382 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 CYP11B2P19099 503 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 MUTP22033 750 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 FCARP24071 287 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 RPA1P27694 616 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 VIPR2P41587 438 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 SERPINB4P48594 390 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 PEX3P56589 373 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 PPP2R3AQ06190 1150 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 GRSF1Q12849 480 aaKnown RBP eCLIP6.77□□□□□ -1.33
PABPC1-220ENST00000522658 BFSP1Q12934 665 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 NOLC1Q14978 699 aaKnown RBP eCLIP6.77□□□□□ -1.333e-13■■□□□ 11.8
PABPC1-220ENST00000522658 PON2Q15165 354 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 CYP27C1Q4G0S4 372 aa6.77□□□□□ -1.33
PABPC1-220ENST00000522658 EEF1DP3Q658K8 133 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms