RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 HOXA9P31269 272 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 SLC5A3P53794 718 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 MTMR3Q13615 1198 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 VEPH1Q14D04 833 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 PTPN20Q4JDL3 420 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 TMEM110Q86TL2 294 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 ERICH1Q86X53 443 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 CCDC170Q8IYT3 715 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 C12orf76Q8N812 135 aaPredicted RBP25.47■■□□□ 1.67
PVT1-212ENST00000521951 SCAMP5Q8TAC9 235 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 LRRC4Q9HBW1 653 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 CYLDQ9NQC7 956 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 SPTLC3Q9NUV7 552 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 TJP2Q9UDY2 1190 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 NAGPAQ9UK23 515 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 NENFQ9UMX5 172 aa25.47■■□□□ 1.67
PVT1-212ENST00000521951 ZNF638Q14966 1978 aaKnown RBP25.46■■□□□ 1.67
PVT1-212ENST00000521951 PIK3R2O00459 728 aa25.46■■□□□ 1.67
PVT1-212ENST00000521951 NCK2O43639 380 aa25.46■■□□□ 1.67
PVT1-212ENST00000521951 SRGAP2BP0DMP2 458 aa25.46■■□□□ 1.67
PVT1-212ENST00000521951 FOSL2P15408 326 aa25.46■■□□□ 1.67
PVT1-212ENST00000521951 NSFP46459 744 aaKnown RBP25.46■■□□□ 1.67
PVT1-212ENST00000521951 USP46P62068 366 aa25.46■■□□□ 1.67
PVT1-212ENST00000521951 MTF1Q14872 753 aa25.46■■□□□ 1.67
PVT1-212ENST00000521951 CTC1Q2NKJ3 1217 aa25.46■■□□□ 1.67
PVT1-212ENST00000521951 ALKBH5Q6P6C2 394 aaKnown RBP25.46■■□□□ 1.67
PVT1-212ENST00000521951 RAD9BQ6WBX8 426 aa25.46■■□□□ 1.67
PVT1-212ENST00000521951 ASB3Q9Y575 518 aa25.46■■□□□ 1.67
PVT1-212ENST00000521951 CCDC195A0A1B0GUA6 201 aa25.45■■□□□ 1.66
PVT1-212ENST00000521951 RTN2O75298 545 aa25.45■■□□□ 1.66
PVT1-212ENST00000521951 CSH1P0DML2 217 aa25.45■■□□□ 1.66
PVT1-212ENST00000521951 CSH2P0DML3 217 aa25.45■■□□□ 1.66
PVT1-212ENST00000521951 LCP1P13796 627 aa25.45■■□□□ 1.66
PVT1-212ENST00000521951 ACADSBP45954 432 aa25.45■■□□□ 1.66
PVT1-212ENST00000521951 TKTL1P51854 596 aa25.45■■□□□ 1.66
PVT1-212ENST00000521951 CCDC122Q5T0U0 273 aa25.45■■□□□ 1.66
PVT1-212ENST00000521951 DNAJB7Q7Z6W7 309 aaPredicted RBP25.45■■□□□ 1.66
PVT1-212ENST00000521951 DNAAF5Q86Y56 855 aa25.45■■□□□ 1.66
PVT1-212ENST00000521951 PHF13Q86YI8 300 aaPredicted RBP25.45■■□□□ 1.66
PVT1-212ENST00000521951 CCDC112Q8NEF3 446 aa25.45■■□□□ 1.66
PVT1-212ENST00000521951 PSMG2Q969U7 264 aa25.45■■□□□ 1.66
PVT1-212ENST00000521951 PRKD2Q9BZL6 878 aa25.45■■□□□ 1.66
PVT1-212ENST00000521951 IL37Q9NZH6 218 aa25.45■■□□□ 1.66
PVT1-212ENST00000521951 EPN1Q9Y6I3 576 aaPredicted RBP25.45■■□□□ 1.66
PVT1-212ENST00000521951 E5RJQ4 531 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 RTN3O95197 1032 aaPredicted RBP25.44■■□□□ 1.66
PVT1-212ENST00000521951 FTLP02792 175 aaPredicted RBP25.44■■□□□ 1.66
PVT1-212ENST00000521951 HMGA1P17096 107 aaKnown RBP25.44■■□□□ 1.66
PVT1-212ENST00000521951 MMP8P22894 467 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 CYLC1P35663 651 aaPredicted RBP25.44■■□□□ 1.66
PVT1-212ENST00000521951 ADIGQ0VDE8 80 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 IFRD2Q12894 506 aaPredicted RBP25.44■■□□□ 1.66
PVT1-212ENST00000521951 COL19A1Q14993 1142 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 C2CD6Q53TS8 623 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 ANKRD54Q6NXT1 300 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 ITIH5Q86UX2 942 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 ELMOD1Q8N336 334 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 DOCK6Q96HP0 2047 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 ZNF512Q96ME7 567 aaPredicted RBP25.44■■□□□ 1.66
PVT1-212ENST00000521951 ISCUQ9H1K1 167 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 SFXN1Q9H9B4 322 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 COMMD8Q9NX08 183 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 CLDND1Q9NY35 253 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 MAGED2Q9UNF1 606 aaPredicted RBP25.44■■□□□ 1.66
PVT1-212ENST00000521951 USP3Q9Y6I4 520 aa25.44■■□□□ 1.66
PVT1-212ENST00000521951 ZNF263O14978 683 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 PAPLNO95428 1278 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 ERBB2P04626 1255 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 GABRB2P47870 512 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 CCZ1BP86790 482 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 CCZ1P86791 482 aaPredicted RBP25.43■■□□□ 1.66
PVT1-212ENST00000521951 PTP4A2Q12974 167 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 CCDC85BQ15834 202 aaPredicted RBP25.43■■□□□ 1.66
PVT1-212ENST00000521951 TAF12Q16514 161 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 PPP1R2P3Q6NXS1 205 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 MMS22LQ6ZRQ5 1243 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 MSANTD4Q8NCY6 345 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 CMASQ8NFW8 434 aaPredicted RBP25.43■■□□□ 1.66
PVT1-212ENST00000521951 FEZF2Q8TBJ5 459 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 IPO4Q8TEX9 1081 aaKnown RBP25.43■■□□□ 1.66
PVT1-212ENST00000521951 ZNF707Q96C28 371 aaPredicted RBP25.43■■□□□ 1.66
PVT1-212ENST00000521951 C18orf8Q96DM3 657 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 C11orf70Q9BRQ4 267 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 TTLL2Q9BWV7 592 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 ULBP1Q9BZM6 244 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 SYNCQ9H7C4 482 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 ADAM22Q9P0K1 906 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 CLEC1BQ9P126 229 aa25.43■■□□□ 1.66
PVT1-212ENST00000521951 NDUFA10O95299 355 aa25.42■■□□□ 1.66
PVT1-212ENST00000521951 POU2F2P09086 479 aa25.42■■□□□ 1.66
PVT1-212ENST00000521951 YWHAQP27348 245 aa25.42■■□□□ 1.66
PVT1-212ENST00000521951 SNX16P57768 344 aa25.42■■□□□ 1.66
PVT1-212ENST00000521951 DLX2Q07687 328 aaPredicted RBP25.42■■□□□ 1.66
PVT1-212ENST00000521951 SYCE2Q6PIF2 218 aa25.42■■□□□ 1.66
PVT1-212ENST00000521951 TMC5Q6UXY8 1006 aa25.42■■□□□ 1.66
PVT1-212ENST00000521951 MON1BQ7L1V2 547 aa25.42■■□□□ 1.66
PVT1-212ENST00000521951 SCUBE3Q8IX30 993 aa25.42■■□□□ 1.66
PVT1-212ENST00000521951 MCOLN2Q8IZK6 566 aa25.42■■□□□ 1.66
PVT1-212ENST00000521951 SIX6OS1Q8N1H7 587 aa25.42■■□□□ 1.66
PVT1-212ENST00000521951 PABPC5Q96DU9 382 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms