RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 PRIM2P49643 509 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 FXR1P51114 621 aaKnown RBP eCLIP5.37□□□□□ -1.55
NPM1-207ENST00000521260 COPB1P53618 953 aaKnown RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 WNT7BP56706 349 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 CABP4P57796 275 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 RAB14P61106 215 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 POLR2GP62487 172 aaKnown RBP eCLIP5.37□□□□□ -1.55
NPM1-207ENST00000521260 HERVK_113P62684 666 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 PHC1P78364 1004 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 CYP4F8P98187 520 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 FOXK2Q01167 660 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 ZNF33BQ06732 778 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 TCIRG1Q13488 830 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 DHX34Q14147 1143 aaKnown RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 MRPL58Q14197 206 aaKnown RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 DSC3Q14574 896 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 NPTX1Q15818 432 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 MAPK6Q16659 721 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 LONRF1Q17RB8 773 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 LSM12Q3MHD2 195 aaKnown RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 FAM153CQ494X1 144 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 VWA3BQ502W6 1294 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 TTC39AQ5SRH9 613 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 RARS2Q5T160 578 aaKnown RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 ARMC4Q5T2S8 1044 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 SHEQ5VZ18 495 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 FAM91A1Q658Y4 838 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 RANBP10Q6VN20 620 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 KYAT3Q6YP21 454 aaKnown RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 BEND4Q6ZU67 534 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 SPATA31D4Q6ZUB0 917 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 USP43Q70EL4 1123 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 TRMT10CQ7L0Y3 403 aaKnown RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 EPM2AIP1Q7L775 607 aaPredicted RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 ARPINQ7Z6K5 226 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 DHDDSQ86SQ9 333 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 FAM124AQ86V42 546 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 LRRTM3Q86VH5 581 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 GATAD2AQ86YP4 633 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 ZSCAN29Q8IWY8 852 aaPredicted RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 C12orf56Q8IXR9 622 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 ZNF34Q8IZ26 560 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 FAM9CQ8IZT9 166 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 SYCE1Q8N0S2 351 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 REXO1Q8N1G1 1221 aaKnown RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 FLCNQ8NFG4 579 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 ST13P5Q8NFI4 369 aaPredicted RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 TTLQ8NG68 377 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 ZFP28Q8NHY6 868 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 TTC8Q8TAM2 541 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 TEX47Q8TBZ9 253 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 FAM172AQ8WUF8 416 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 CAPSLQ8WWF8 208 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 SEC14L1Q92503 715 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 ANKS1AQ92625 1134 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 DACT3Q96B18 629 aaPredicted RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 SH3KBP1Q96B97 665 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 EGLN2Q96KS0 407 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 TM9SF2Q99805 663 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 ZC3H12CQ9C0D7 883 aaKnown RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 NT5C3AQ9H0P0 336 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 MYLK2Q9H1R3 596 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 SLC6A15Q9H2J7 730 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 DPEP3Q9H4B8 488 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 PHAXQ9H814 394 aaKnown RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 NHEJ1Q9H9Q4 299 aaPredicted RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 KCNK13Q9HB14 408 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 SPC25Q9HBM1 224 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 KIAA1586Q9HCI6 787 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 RAVER2Q9HCJ3 691 aaKnown RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 ATP13A2Q9NQ11 1180 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 WASH6PQ9NQA3 447 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 PARVAQ9NVD7 372 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 FBXO28Q9NVF7 368 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 ABI2Q9NYB9 513 aaPredicted RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 ZC3H7BQ9UGR2 993 aaKnown RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 FAM153AQ9UHL3 310 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 APPL1Q9UKG1 709 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 GRID1Q9ULK0 1009 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 AP3M1Q9Y2T2 418 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 MTO1Q9Y2Z2 717 aaKnown RBP5.37□□□□□ -1.55
NPM1-207ENST00000521260 IPPQ9Y573 584 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 CSNK1G3Q9Y6M4 447 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 FLT1P17948 1338 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 RFX7Q2KHR2 1363 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 ERVK-7P63135 1459 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 ARAP3Q8WWN8 1544 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 CAMSAP1Q5T5Y3 1602 aa5.37□□□□□ -1.55
NPM1-207ENST00000521260 SYNJ2BP-COX16A0A087WUM0 186 aa5.36□□□□□ -1.55
NPM1-207ENST00000521260 PNMA6FA0A0J9YX94 578 aa5.36□□□□□ -1.55
NPM1-207ENST00000521260 SSU72P8A0A1W2PR75 194 aa5.36□□□□□ -1.55
NPM1-207ENST00000521260 ISPDA4D126 451 aa5.36□□□□□ -1.55
NPM1-207ENST00000521260 SH3D21A4FU49 640 aa5.36□□□□□ -1.55
NPM1-207ENST00000521260 KRBA1A5PL33 1030 aa5.36□□□□□ -1.55
NPM1-207ENST00000521260 EFCAB10A6NFE3 127 aa5.36□□□□□ -1.55
NPM1-207ENST00000521260 BTN3A1O00481 513 aa5.36□□□□□ -1.55
NPM1-207ENST00000521260 TXNDC9O14530 226 aa5.36□□□□□ -1.55
NPM1-207ENST00000521260 SLC9A3R1O14745 358 aaPredicted RBP5.36□□□□□ -1.55
NPM1-207ENST00000521260 ZBTB39O15060 712 aa5.36□□□□□ -1.55
NPM1-207ENST00000521260 ACSL4O60488 711 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms