RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 FAM35AQ86V20 835 aa16.82■□□□□ 0.28
CLN8-205ENST00000520991 NUP93Q8N1F7 819 aa16.82■□□□□ 0.28
CLN8-205ENST00000520991 SDCBP2Q9H190 292 aa16.82■□□□□ 0.28
CLN8-205ENST00000520991 GOLPH3LQ9H4A5 285 aa16.82■□□□□ 0.28
CLN8-205ENST00000520991 TMEM30AQ9NV96 361 aa16.82■□□□□ 0.28
CLN8-205ENST00000520991 USP18Q9UMW8 372 aa16.82■□□□□ 0.28
CLN8-205ENST00000520991 SLC8A2Q9UPR5 921 aa16.82■□□□□ 0.28
CLN8-205ENST00000520991 MAPK8IP1Q9UQF2 711 aa16.82■□□□□ 0.28
CLN8-205ENST00000520991 TRAF3IP3Q9Y228 551 aa16.82■□□□□ 0.28
CLN8-205ENST00000520991 HELZP42694 1942 aaKnown RBP16.81■□□□□ 0.28
CLN8-205ENST00000520991 LEFTY2O00292 366 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 IKBKBO14920 756 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 RNF40O75150 1001 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 RTN3O95197 1032 aaPredicted RBP16.81■□□□□ 0.28
CLN8-205ENST00000520991 NR2F2P24468 414 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 YWHAQP27348 245 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 VAMP7P51809 220 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 SLC7A9P82251 487 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 SRSF5Q13243 272 aaKnown RBP16.81■□□□□ 0.28
CLN8-205ENST00000520991 FBXO43Q4G163 708 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 NAIF1Q69YI7 327 aaPredicted RBP16.81■□□□□ 0.28
CLN8-205ENST00000520991 PKN3Q6P5Z2 889 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 CEP68Q76N32 757 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 SV2AQ7L0J3 742 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.81■□□□□ 0.28
CLN8-205ENST00000520991 ACOT1Q86TX2 421 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 PDZD8Q8NEN9 1154 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 TAF4BQ92750 862 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 CD101Q93033 1021 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 FBXO32Q969P5 355 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 SMARCD1Q96GM5 515 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 CCDC34Q96HJ3 373 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 IMPG2Q9BZV3 1241 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 FBRSL1Q9HCM7 1045 aaKnown RBP16.81■□□□□ 0.28
CLN8-205ENST00000520991 DMAP1Q9NPF5 467 aaPredicted RBP16.81■□□□□ 0.28
CLN8-205ENST00000520991 SMPD4Q9NXE4 827 aa16.81■□□□□ 0.28
CLN8-205ENST00000520991 MAPK13O15264 365 aa16.8■□□□□ 0.28
CLN8-205ENST00000520991 HRO43593 1189 aa16.8■□□□□ 0.28
CLN8-205ENST00000520991 AP1G2O75843 785 aa16.8■□□□□ 0.28
CLN8-205ENST00000520991 ZNF202O95125 648 aa16.8■□□□□ 0.28
CLN8-205ENST00000520991 KRT13P13646 458 aa16.8■□□□□ 0.28
CLN8-205ENST00000520991 TRIM21P19474 475 aaKnown RBP16.8■□□□□ 0.28
CLN8-205ENST00000520991 RPL13P26373 211 aaKnown RBP16.8■□□□□ 0.28
CLN8-205ENST00000520991 HOXA6P31267 233 aa16.8■□□□□ 0.28
CLN8-205ENST00000520991 ORC1Q13415 861 aa16.8■□□□□ 0.28
CLN8-205ENST00000520991 INTS8Q75QN2 995 aaKnown RBP16.8■□□□□ 0.28
CLN8-205ENST00000520991 WDR5BQ86VZ2 330 aa16.8■□□□□ 0.28
CLN8-205ENST00000520991 KCNK16Q96T55 309 aa16.8■□□□□ 0.28
CLN8-205ENST00000520991 LINC00597Q9H2U6 94 aa16.8■□□□□ 0.28
CLN8-205ENST00000520991 GDPD2Q9HCC8 539 aa16.8■□□□□ 0.28
CLN8-205ENST00000520991 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.8■□□□□ 0.28
CLN8-205ENST00000520991 KRT82Q9NSB4 513 aa16.8■□□□□ 0.28
CLN8-205ENST00000520991 CPQQ9Y646 472 aa16.8■□□□□ 0.28
CLN8-205ENST00000520991 OLFM2O95897 454 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 ASS1P00966 412 aaKnown RBP16.79■□□□□ 0.28
CLN8-205ENST00000520991 OAS1P00973 400 aaKnown RBP16.79■□□□□ 0.28
CLN8-205ENST00000520991 HLA-DRAP01903 254 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 RETP07949 1114 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 TRIM49P0CI25 452 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 TRIM49CP0CI26 452 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 MBL2P11226 248 aaPredicted RBP16.79■□□□□ 0.28
CLN8-205ENST00000520991 CCDC130P13994 396 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 PXNP49023 591 aaPredicted RBP16.79■□□□□ 0.28
CLN8-205ENST00000520991 NDST1P52848 882 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 SLC5A3P53794 718 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 ZXDBP98169 803 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 LMNB2Q03252 620 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 PUM1Q14671 1186 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLN8-205ENST00000520991 NFIL3Q16649 462 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 SPOPLQ6IQ16 392 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 DGLUCYQ7Z3D6 616 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 FILIP1Q7Z7B0 1213 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 DDX42Q86XP3 938 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLN8-205ENST00000520991 FAM186BQ8IYM0 893 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 GUF1Q8N442 669 aaKnown RBP16.79■□□□□ 0.28
CLN8-205ENST00000520991 RPLP0P6Q8NHW5 317 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 OVCA2Q8WZ82 227 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 RNF38Q9H0F5 515 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 MMRN2Q9H8L6 949 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 HMGXB4Q9UGU5 601 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 DNAH14Q0VDD8 3507 aa16.79■□□□□ 0.28
CLN8-205ENST00000520991 SLC9A3R1O14745 358 aaPredicted RBP16.78■□□□□ 0.28
CLN8-205ENST00000520991 AKAP3O75969 853 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 HOXC13P31276 330 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 PSMC2P35998 433 aaKnown RBP16.78■□□□□ 0.28
CLN8-205ENST00000520991 ASPAP45381 313 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 GCLMP48507 274 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 SPEM2Q0P670 501 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 RSPO4Q2I0M5 234 aaPredicted RBP16.78■□□□□ 0.28
CLN8-205ENST00000520991 C1orf220Q5T0J3 134 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 PAQR9Q6ZVX9 377 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 UNC93AQ86WB7 457 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 FUKQ8N0W3 1084 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 KIAA1958Q8N8K9 716 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 CCDC150Q8NCX0 1101 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 SCAMP5Q8TAC9 235 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 SLC2A14Q8TDB8 520 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 FAM49BQ9NUQ9 324 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 CFAP97Q9P2B7 532 aa16.78■□□□□ 0.28
CLN8-205ENST00000520991 SCAMP3O14828 347 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms