RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 PDE11AQ9HCR9 933 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 PPP4R2Q9NY27 417 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 CFAP97Q9P2B7 532 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 STK17AQ9UEE5 414 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 SLC6A14Q9UN76 642 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 SH3BP1Q9Y3L3 701 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 DENND4CQ5VZ89 1909 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 ATXN2Q99700 1313 aaKnown RBP12.28□□□□□ -0.44
MRPS28-206ENST00000520946 FAM208BQ5VWN6 2430 aa12.28□□□□□ -0.44
MRPS28-206ENST00000520946 SGK1O00141 431 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 ATP2C2O75185 946 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 SYPP08247 313 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 EIF2DP41214 584 aaKnown RBP12.27□□□□□ -0.45
MRPS28-206ENST00000520946 PTGER3P43115 390 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 TNFRSF4P43489 277 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 SLC6A11P48066 632 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 GAD2Q05329 585 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 HNRNPDQ14103 355 aaKnown RBP12.27□□□□□ -0.45
MRPS28-206ENST00000520946 SF3A1Q15459 793 aaKnown RBP12.27□□□□□ -0.45
MRPS28-206ENST00000520946 SURF1Q15526 300 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 DUOXA2Q1HG44 320 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 SOWAHAQ2M3V2 549 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 ANO4Q32M45 955 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 EMC10Q5UCC4 262 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 FAM171BQ6P995 826 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 SLC23A3Q6PIS1 610 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 LRSAM1Q6UWE0 723 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 GPD1LQ8N335 351 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 IL17RCQ8NAC3 791 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 OR6B3Q8NGW1 331 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 GATA6Q92908 595 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 MSRB2Q9Y3D2 182 aa12.27□□□□□ -0.45
MRPS28-206ENST00000520946 ZNF840PA6NDX5 716 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 ZNF233A6NK53 670 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 GABRDO14764 452 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 HCRTO43612 131 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 NDUFS2O75306 463 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 ITPKAP23677 461 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 LMO2P25791 158 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 HOXD12P35452 270 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 GNL1P36915 607 aaPredicted RBP12.26□□□□□ -0.45
MRPS28-206ENST00000520946 SLC7A9P82251 487 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 RING1Q06587 406 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 KCNA1Q09470 495 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 RABEP1Q15276 862 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 CCDC142Q17RM4 750 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 MDH1BQ5I0G3 518 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 BRAPQ7Z569 592 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 RGL4Q8IZJ4 473 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 ZNF513Q8N8E2 541 aaPredicted RBP12.26□□□□□ -0.45
MRPS28-206ENST00000520946 KIAA1958Q8N8K9 716 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 NAT16Q8N8M0 369 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 OLIG1Q8TAK6 271 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 MYCBPAPQ8TBZ2 947 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 FNBP1Q96RU3 617 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 PKMYT1Q99640 499 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 TMEM74BQ9NUR3 256 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 DEC1Q9P2X7 70 aa12.26□□□□□ -0.45
MRPS28-206ENST00000520946 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.26□□□□□ -0.45
MRPS28-206ENST00000520946 F8VP50 259 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 KIAA0391O15091 583 aaKnown RBP12.25□□□□□ -0.45
MRPS28-206ENST00000520946 SERPINF2P08697 491 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 GNSP15586 552 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 YWHAQP27348 245 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 USP46P62068 366 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 TNNC1P63316 161 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 TAF10Q12962 218 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 ZNF423Q2M1K9 1284 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 LY6G5CQ5SRR4 150 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 C10orf76Q5T2E6 689 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 SYCP2LQ5T4T6 812 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 RHBDF2Q6PJF5 856 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 CHCHD4Q8N4Q1 142 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 FRMD1Q8N878 549 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 PDZD8Q8NEN9 1154 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 FBXO32Q969P5 355 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 PCED1BQ96HM7 432 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 EPSTI1Q96J88 318 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 C8orf48Q96LL4 319 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 CBWD1Q9BRT8 395 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 RNF38Q9H0F5 515 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 ZDHHC4Q9NPG8 344 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 PANK4Q9NVE7 773 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 INTS13Q9NVM9 706 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 MBD1Q9UIS9 605 aaPredicted RBP12.25□□□□□ -0.45
MRPS28-206ENST00000520946 PILRBQ9UKJ0 227 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 KLK13Q9UKR3 277 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 WASF3Q9UPY6 502 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 ATP8B3O60423 1300 aa12.25□□□□□ -0.45
MRPS28-206ENST00000520946 E2F8A0AVK6 867 aa12.24□□□□□ -0.45
MRPS28-206ENST00000520946 ANTXRLA6NF34 631 aa12.24□□□□□ -0.45
MRPS28-206ENST00000520946 EIF4E1BA6NMX2 242 aaKnown RBP12.24□□□□□ -0.45
MRPS28-206ENST00000520946 OBSL1O75147 1896 aa12.24□□□□□ -0.45
MRPS28-206ENST00000520946 ZNF217O75362 1048 aa12.24□□□□□ -0.45
MRPS28-206ENST00000520946 RTN3O95197 1032 aaPredicted RBP12.24□□□□□ -0.45
MRPS28-206ENST00000520946 HOXB3P14651 431 aaPredicted RBP12.24□□□□□ -0.45
MRPS28-206ENST00000520946 HOXB2P14652 356 aa12.24□□□□□ -0.45
MRPS28-206ENST00000520946 TNNI1P19237 187 aa12.24□□□□□ -0.45
MRPS28-206ENST00000520946 WARSP23381 471 aaKnown RBP12.24□□□□□ -0.45
MRPS28-206ENST00000520946 STAT6P42226 847 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms