RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 GLB1L2Q8IW92 636 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 PRPF38AQ8NAV1 312 aaKnown RBP6.87□□□□□ -1.31
PABPC1-216ENST00000520868 CACTINQ8WUQ7 758 aaKnown RBP6.87□□□□□ -1.31
PABPC1-216ENST00000520868 CHMP4CQ96CF2 233 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 TIFAQ96CG3 184 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 ZNF512Q96ME7 567 aaPredicted RBP6.87□□□□□ -1.31
PABPC1-216ENST00000520868 GLT1D1Q96MS3 346 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 TTC1Q99614 292 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 SPC25Q9HBM1 224 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.87□□□□□ -1.31
PABPC1-216ENST00000520868 NYAP2Q9P242 653 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 NAV1Q8NEY1 1877 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 LTBP2Q14767 1821 aa6.87□□□□□ -1.31
PABPC1-216ENST00000520868 ZNFX1Q9P2E3 1918 aaKnown RBP6.86□□□□□ -1.31
PABPC1-216ENST00000520868 ELP1O95163 1332 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 ZBED9Q6R2W3 1325 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 ZNF236Q9UL36 1845 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.86□□□□□ -1.31
PABPC1-216ENST00000520868 ULK1O75385 1050 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 PRDM1O75626 825 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 CLSTN1O94985 981 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 ZNF202O95125 648 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 LY86O95711 162 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 CSF2RAP15509 400 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 SOX5P35711 763 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 MANFP55145 182 aaKnown RBP6.86□□□□□ -1.31
PABPC1-216ENST00000520868 BEX3Q00994 111 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 CD69Q07108 199 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 PPARAQ07869 468 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 ABHD18Q0P651 414 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 PPIGQ13427 754 aaKnown RBP eCLIP6.86□□□□□ -1.311e-6■□□□□ 8.6
PABPC1-216ENST00000520868 TMEM240Q5SV17 173 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 CCDC174Q6PII3 467 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 ZNF365Q70YC5 407 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 NOL8Q76FK4 1167 aaKnown RBP6.86□□□□□ -1.31
PABPC1-216ENST00000520868 THNSL2Q86YJ6 484 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 ZNF444Q8N0Y2 327 aaPredicted RBP6.86□□□□□ -1.31
PABPC1-216ENST00000520868 TMEM199Q8N511 208 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 MSL3Q8N5Y2 521 aaKnown RBP6.86□□□□□ -1.31
PABPC1-216ENST00000520868 PCSK9Q8NBP7 692 aaKnown RBP6.86□□□□□ -1.31
PABPC1-216ENST00000520868 STRBPQ96SI9 672 aaKnown RBP6.86□□□□□ -1.31
PABPC1-216ENST00000520868 PRDM12Q9H4Q4 367 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 HOMER2Q9NSB8 354 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 ZBTB40Q9NUA8 1239 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 ARPP21Q9UBL0 812 aaPredicted RBP6.86□□□□□ -1.31
PABPC1-216ENST00000520868 TBX21Q9UL17 535 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 ISY1Q9ULR0 285 aaKnown RBP6.86□□□□□ -1.31
PABPC1-216ENST00000520868 DDX19BQ9UMR2 479 aa6.86□□□□□ -1.31
PABPC1-216ENST00000520868 A0A0G2JMZ2 1700 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 A0A0U1RQG5 324 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-216ENST00000520868 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-216ENST00000520868 GOLGA6L6A8MZA4 724 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 TMEM232C9JQI7 657 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 GNAT2P19087 354 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 CYP2C18P33260 490 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 MCM7P33993 719 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 SESN3P58005 492 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 CNTN2Q02246 1040 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 TUBA3CQ13748 450 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 SBK1Q52WX2 424 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 SDE2Q6IQ49 451 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 TUBA3EQ6PEY2 450 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 ARMCX2Q7L311 632 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 APBB1IPQ7Z5R6 666 aaPredicted RBP6.85□□□□□ -1.31
PABPC1-216ENST00000520868 PIK3C3Q8NEB9 887 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 GPR87Q9BY21 358 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 ANO3Q9BYT9 981 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 LRRCC1Q9C099 1032 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 PCED1AQ9H1Q7 454 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 MS4A5Q9H3V2 200 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 ABHD16BQ9H3Z7 469 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 CAAP1Q9H8G2 361 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 SLC38A10Q9HBR0 1119 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 ING3Q9NXR8 418 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 FBXO40Q9UH90 709 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 FEM1BQ9UK73 627 aa6.85□□□□□ -1.31
PABPC1-216ENST00000520868 APOBEC2Q9Y235 224 aaKnown RBP6.85□□□□□ -1.31
PABPC1-216ENST00000520868 ROBO3Q96MS0 1386 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 BAZ2AQ9UIF9 1905 aaKnown RBP6.84□□□□□ -1.31
PABPC1-216ENST00000520868 MROH7Q68CQ1 1323 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 IGKV6D-41A0A0C4DH26 115 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 LCHNA4D1U4 455 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 ATP2A1O14983 1001 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 CTAGE5O15320 804 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 RNF113AO15541 343 aaKnown RBP6.84□□□□□ -1.31
PABPC1-216ENST00000520868 PEX11BO96011 259 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 FGBP02675 491 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 CST5P28325 142 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-216ENST00000520868 TDO2P48775 406 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 CCL23P55773 120 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 WNT3AP56704 352 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 SNAP25P60880 206 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 TNFAIP2Q03169 654 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 TSHZ3Q63HK5 1081 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 CCDC62Q6P9F0 684 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 PSRC1Q6PGN9 363 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-216ENST00000520868 CXCL17Q6UXB2 119 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 Q6ZRM9 215 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 TAS1R1Q7RTX1 841 aa6.84□□□□□ -1.31
PABPC1-216ENST00000520868 MDGA1Q8NFP4 955 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms