RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 KAT7O95251 611 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 CYP17A1P05093 508 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 HNRNPLP14866 589 aaKnown RBP eCLIP20.26■□□□□ 0.838e-7■□□□□ 10.2
CTNNA1-213ENST00000519113 ENGP17813 658 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 GARTP22102 1010 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 ANXA13P27216 316 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 HOXD12P35452 270 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 ZXDBP98169 803 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 DHCR24Q15392 516 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 SOWAHAQ2M3V2 549 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 L1TD1Q5T7N2 865 aaKnown RBP20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 LYSMD4Q5XG99 296 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 KIAA1211LQ6NV74 962 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 SLC23A3Q6PIS1 610 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 ARMCX6Q7L4S7 300 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 DYMQ7RTS9 669 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 SAAL1Q96ER3 474 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 SYT15Q9BQS2 421 aa20.26■□□□□ 0.83
CTNNA1-213ENST00000519113 A0A0A0MRY4 1105 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 ANTXRLA6NF34 631 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 H0Y626 953 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 SGK1O00141 431 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 HCRTO43612 131 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 TRIM16O95361 564 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 TMEM191BP0C7N4 346 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 GAP43P17677 238 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 BDNFP23560 247 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 TIE1P35590 1138 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 PTGER3P43115 390 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 TNFRSF4P43489 277 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 ATXN3P54252 364 aaPredicted RBP20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 KRT85P78386 507 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 DNM1Q05193 864 aaKnown RBP20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 KCNA1Q09470 495 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 LRSAM1Q6UWE0 723 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 HDDC3Q8N4P3 179 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 ZSWIM2Q8NEG5 633 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 CEP76Q8TAP6 659 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 TMEM74BQ9NUR3 256 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 SIX4Q9UIU6 781 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 PCDHB13Q9Y5F0 798 aa20.25■□□□□ 0.83
CTNNA1-213ENST00000519113 ZNF840PA6NDX5 716 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 TRIM66O15016 1216 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 ATP2C2O75185 946 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 ADH1CP00326 375 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 GRIA2P42262 883 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 SLC6A11P48066 632 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 SIM1P81133 766 aaPredicted RBP20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 SEMA3BQ13214 749 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 MAP7D1Q3KQU3 841 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 PIP4P1Q86T03 277 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 DDX42Q86XP3 938 aaKnown RBP eCLIP20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 SYCP3Q8IZU3 236 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 PGBD3Q8N328 593 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 HMGB4Q8WW32 186 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 MYLPFQ96A32 169 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 ANKRD36BP1Q96IX9 119 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 TTLL2Q9BWV7 592 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 MTMR12Q9C0I1 747 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 ARHGEF4Q9NR80 690 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 STK17AQ9UEE5 414 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 MBD1Q9UIS9 605 aaPredicted RBP20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 PILRBQ9UKJ0 227 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 LHX6Q9UPM6 363 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 CPQQ9Y646 472 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 KIAA1549LQ6ZVL6 1849 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 NBEAQ8NFP9 2946 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 FREM2Q5SZK8 3169 aa20.24■□□□□ 0.83
CTNNA1-213ENST00000519113 SPAARA0A1B0GVQ0 90 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 GCNT3O95395 438 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 CFIP05156 583 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 LMO2P25791 158 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 USP46P62068 366 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 PSMC1P62191 440 aaKnown RBP20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 NOP14P78316 857 aaKnown RBP20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 CYP27A1Q02318 531 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 GRIN1Q05586 938 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 GFPT1Q06210 699 aaPredicted RBP20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 RING1Q06587 406 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 DUOXA1Q1HG43 343 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 SCARA3Q6AZY7 606 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 RHBDF2Q6PJF5 856 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 LIMS2Q7Z4I7 341 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 NOC3LQ8WTT2 800 aaKnown RBP20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 HPDLQ96IR7 371 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 RNF38Q9H0F5 515 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 PDE11AQ9HCR9 933 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 SMPD4Q9NXE4 827 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 TBC1D7Q9P0N9 293 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 TBC1D14Q9P2M4 693 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 CCDC39Q9UFE4 941 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 KLK13Q9UKR3 277 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 SLC6A14Q9UN76 642 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 MYO16Q9Y6X6 1858 aa20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 ASCC3Q8N3C0 2202 aaKnown RBP20.23■□□□□ 0.83
CTNNA1-213ENST00000519113 TCRBV21S2A2A0A5A6 115 aa20.22■□□□□ 0.83
CTNNA1-213ENST00000519113 GOLGA8IPA6NC78 632 aa20.22■□□□□ 0.83
CTNNA1-213ENST00000519113 GOLGA8JA6NMD2 632 aa20.22■□□□□ 0.83
CTNNA1-213ENST00000519113 AP5Z1O43299 807 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms