RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 ICA1Q05084 483 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 NSUN2Q08J23 767 aaKnown RBP eCLIP3.62□□□□□ -1.83
SKP1-203ENST00000517625 PUM1Q14671 1186 aaKnown RBP eCLIP3.62□□□□□ -1.831e-10■■□□□ 11.7
SKP1-203ENST00000517625 PDCD2Q16342 344 aaPredicted RBP3.62□□□□□ -1.83
SKP1-203ENST00000517625 MAPKAPK3Q16644 382 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 TXNRD1Q16881 649 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 TMEM63BQ5T3F8 832 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 FAXCQ5TGI0 409 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 WDR53Q7Z5U6 358 aaPredicted RBP3.62□□□□□ -1.83
SKP1-203ENST00000517625 IZUMO1Q8IYV9 350 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 TOR1AIP2Q8NFQ8 470 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 RP9Q8TA86 221 aaKnown RBP3.62□□□□□ -1.83
SKP1-203ENST00000517625 DNAJB14Q8TBM8 379 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 FBXL20Q96IG2 436 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 VN1R3Q9BXE9 311 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 RGL1Q9NZL6 768 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 FNIP2Q9P278 1114 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 LRIT1Q9P2V4 623 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 VPS51Q9UID3 782 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 GABRQQ9UN88 632 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 USP22Q9UPT9 525 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 HPSEQ9Y251 543 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 MAN2B2Q9Y2E5 1009 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 DAAM1Q9Y4D1 1078 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 PCDHGB2Q9Y5G2 931 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 ADGRA2Q96PE1 1338 aa3.62□□□□□ -1.83
SKP1-203ENST00000517625 A0A087WV62 115 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 A0A087WZ62 844 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 PLEKHD1A6NEE1 506 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 F5H423 210 aaPredicted RBP3.61□□□□□ -1.83
SKP1-203ENST00000517625 hCG_1984214I3L0E3 225 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 PODXLO00592 558 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 PPM1DO15297 605 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 FFAR2O15552 330 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 TPD52L2O43399 206 aaKnown RBP3.61□□□□□ -1.83
SKP1-203ENST00000517625 CCNT2O60583 730 aaKnown RBP3.61□□□□□ -1.83
SKP1-203ENST00000517625 SNX2O60749 519 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 COQ9O75208 318 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 SKAP2O75563 359 aaPredicted RBP3.61□□□□□ -1.83
SKP1-203ENST00000517625 C6P13671 934 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 MST1P26927 711 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 RBL1P28749 1068 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 UQCRC1P31930 480 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 IL6STP40189 918 aaPredicted RBP3.61□□□□□ -1.83
SKP1-203ENST00000517625 ALDH9A1P49189 494 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 PGDP52209 483 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 SEC24CP53992 1094 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 POLE2P56282 527 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 CHAF1AQ13111 956 aaPredicted RBP3.61□□□□□ -1.83
SKP1-203ENST00000517625 GRM1Q13255 1194 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 TBCCQ15814 346 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 ST3GAL2Q16842 350 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 ERCC6LQ2NKX8 1250 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 GRAMD1BQ3KR37 738 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.61□□□□□ -1.83
SKP1-203ENST00000517625 MANEALQ5VSG8 457 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 DENND2CQ68D51 928 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 ANKRD16Q6P6B7 361 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 KIAA0408Q6ZU52 694 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 ZNF551Q7Z340 670 aaPredicted RBP3.61□□□□□ -1.83
SKP1-203ENST00000517625 ZNF804AQ7Z570 1209 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 CAVIN3Q969G5 261 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 LRRC46Q96FV0 321 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 SLC25A32Q9H2D1 315 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 HELLSQ9NRZ9 838 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 TBC1D23Q9NUY8 699 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 SLC39A10Q9ULF5 831 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 MAGED2Q9UNF1 606 aaPredicted RBP3.61□□□□□ -1.83
SKP1-203ENST00000517625 MRPS17Q9Y2R5 130 aaKnown RBP3.61□□□□□ -1.83
SKP1-203ENST00000517625 SNX14Q9Y5W7 946 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 COL15A1P39059 1388 aa3.61□□□□□ -1.83
SKP1-203ENST00000517625 A1L4Q6 167 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 FAM234BA2RU67 622 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 A8MVJ9 347 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 PSMD9O00233 223 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 SYT5O00445 386 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 CYR61O00622 381 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 KIAA0355O15063 1070 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 TCEA3O75764 348 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 IL6RP08887 468 aaPredicted RBP3.6□□□□□ -1.83
SKP1-203ENST00000517625 ZFXP17010 805 aaPredicted RBP3.6□□□□□ -1.83
SKP1-203ENST00000517625 LIPAP38571 399 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 MPLP40238 635 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 GRIA3P42263 894 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 GDF5P43026 501 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 HNRNPMP52272 730 aaKnown RBP eCLIP3.6□□□□□ -1.831e-11■■■■□ 25
SKP1-203ENST00000517625 TPTEP56180 551 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 SOX10P56693 466 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 TIRAPP58753 221 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 SUMO2P61956 95 aaKnown RBP3.6□□□□□ -1.83
SKP1-203ENST00000517625 FOXO1Q12778 655 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 GPS1Q13098 491 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 ATP1A4Q13733 1029 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 BLMHQ13867 455 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 RAB30Q15771 203 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 TRIM71Q2Q1W2 868 aaKnown RBP3.6□□□□□ -1.83
SKP1-203ENST00000517625 FAM83BQ5T0W9 1011 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 GORABQ5T7V8 394 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 DEPDC1Q5TB30 811 aa3.6□□□□□ -1.83
SKP1-203ENST00000517625 HECTD2Q5U5R9 776 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms