RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PIK3R2O00459 728 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 TRDMT1O14717 391 aaKnown RBP6.92□□□□□ -1.3
CPNE3-203ENST00000517490 ETS1P14921 441 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 NFIAQ12857 509 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 XKR3Q5GH77 459 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 EFHC2Q5JST6 749 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 C9orf131Q5VYM1 1079 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 CDCA2Q69YH5 1023 aaPredicted RBP6.92□□□□□ -1.3
CPNE3-203ENST00000517490 MTHFD1LQ6UB35 978 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 PHF13Q86YI8 300 aaPredicted RBP6.92□□□□□ -1.3
CPNE3-203ENST00000517490 TTC39CQ8N584 583 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 ZNF341Q9BYN7 854 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 MTFR1LQ9H019 292 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 IKZF4Q9H2S9 585 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 AS3MTQ9HBK9 375 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 SLC38A10Q9HBR0 1119 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 CCDC189A1A4V9 331 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 A6NHS1 94 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 UBAP1LF5GYI3 381 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 GIPC1O14908 333 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 DNAJC6O75061 913 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 ZNF189O75820 626 aaPredicted RBP6.92□□□□□ -1.3
CPNE3-203ENST00000517490 TM7SF2O76062 418 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 RAG1P15918 1043 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 SERPINB8P50452 374 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 CDK7P50613 346 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 TAS2R40P59535 323 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 TBL3Q12788 808 aaKnown RBP6.92□□□□□ -1.3
CPNE3-203ENST00000517490 SLC44A4Q53GD3 710 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 CYP4A22Q5TCH4 519 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 SLC30A10Q6XR72 485 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 NIPA1Q7RTP0 329 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 PRUNE1Q86TP1 453 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 STKLD1Q8NE28 680 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 DDX50Q9BQ39 737 aaKnown RBP6.92□□□□□ -1.3
CPNE3-203ENST00000517490 POLLQ9UGP5 575 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 COMMD10Q9Y6G5 202 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 C10orf71Q711Q0 1435 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 INO80B-WBP1J3KQ70 363 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 FAM58BPP0C7Q3 252 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 SRGAP2BP0DMP2 458 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 RPL5P46777 297 aaKnown RBP6.92□□□□□ -1.3
CPNE3-203ENST00000517490 EFNA5P52803 228 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 GABPAQ06546 454 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 TNFAIP1Q13829 316 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 MAPK6Q16659 721 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 PDPK2PQ6A1A2 396 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 ADGRD1Q6QNK2 874 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 RSPH3Q86UC2 560 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 RELL1Q8IUW5 271 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 DEFB107AQ8IZN7 70 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 GALNT4Q8N4A0 578 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 NSUN6Q8TEA1 469 aaKnown RBP6.92□□□□□ -1.3
CPNE3-203ENST00000517490 PSPC1Q8WXF1 523 aaKnown RBP6.92□□□□□ -1.3
CPNE3-203ENST00000517490 PBXIP1Q96AQ6 731 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 CGRRF1Q99675 332 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 WDR18Q9BV38 432 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 INO80BQ9C086 356 aaPredicted RBP6.92□□□□□ -1.3
CPNE3-203ENST00000517490 PMM2O15305 246 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 SERPINA6P08185 405 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 PDGFRAP16234 1089 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 RFC1P35251 1148 aaPredicted RBP6.92□□□□□ -1.3
CPNE3-203ENST00000517490 PDK3Q15120 406 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 ACSBG2Q5FVE4 666 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 STRIP1Q5VSL9 837 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 XRRA1Q6P2D8 792 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 RFWD3Q6PCD5 774 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 RINLQ6ZS11 566 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 CHSY1Q86X52 802 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 CCDC33Q8N5R6 958 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 UCMAQ8WVF2 138 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 ZNF606Q8WXB4 792 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 THAP11Q96EK4 314 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 ZDHHC15Q96MV8 337 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 EPB41L4BQ9H329 900 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 STN1Q9H668 368 aaKnown RBP6.92□□□□□ -1.3
CPNE3-203ENST00000517490 ZNF302Q9NR11 478 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 SLC17A7Q9P2U7 560 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 DNAJB4Q9UDY4 337 aa6.92□□□□□ -1.3
CPNE3-203ENST00000517490 IGKV6D-41A0A0C4DH26 115 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 EME2A4GXA9 379 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 MEI4A8MW99 385 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 UPP2O95045 317 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 SERPINE1P05121 402 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 FDX1P10109 184 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 MYL4P12829 197 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 ENO3P13929 434 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 UQCRBP14927 111 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 HOXD13P35453 343 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 NUDT2P50583 147 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 OSTNP61366 133 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 BTKQ06187 659 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 BST1Q10588 318 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 EFTUD2Q15029 972 aaKnown RBP eCLIP6.91□□□□□ -1.36e-7■■■□□ 16.6
CPNE3-203ENST00000517490 KBTBD12Q3ZCT8 623 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 FASTKD1Q53R41 847 aaKnown RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 ZFP1Q6P2D0 407 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 DRICH1Q6PGQ1 229 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-203ENST00000517490 DSTYKQ6XUX3 929 aa6.91□□□□□ -1.3
CPNE3-203ENST00000517490 KYAT3Q6YP21 454 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms