RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 ATP6V1B1P15313 513 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 AMY2BP19961 511 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SDHAP31040 664 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 HOXD3P31249 432 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ANXA11P50995 505 aaKnown RBP-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 BCAR1P56945 870 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ERVK-21P61565 698 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TUBB4BP68371 445 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 STIM1Q13586 685 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SEC23AQ15436 765 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GPR19Q15760 415 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TBCCQ15814 346 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PRSS53Q2L4Q9 553 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CD300EQ496F6 205 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PREPLQ4J6C6 727 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 C4orf46Q504U0 113 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 DALRD3Q5D0E6 543 aaKnown RBP-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SEL1L3Q68CR1 1132 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ALG1LQ6GMV1 187 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CC2D1AQ6P1N0 951 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ARHGAP36Q6ZRI8 547 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FOXL2NBQ6ZUU3 175 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PDZD4Q76G19 769 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SLC26A9Q7LBE3 791 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 KCNMB4Q86W47 210 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ARL14EPQ8N8R7 260 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TERB1Q8NA31 727 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CNBD1Q8NA66 436 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TMIEQ8NEW7 156 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 LILRB1Q8NHL6 650 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 KLHDC4Q8TBB5 520 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNF473Q8WTR7 871 aaKnown RBP-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NUP133Q8WUM0 1156 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GAB3Q8WWW8 586 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 THAP4Q8WY91 577 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TAAR8Q969N4 342 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 E2F7Q96AV8 911 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MSI2Q96DH6 328 aaKnown RBP-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MARS2Q96GW9 593 aaKnown RBP-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 POM121Q96HA1 1249 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FEM1CQ96JP0 617 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ART5Q96L15 291 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CCDC140Q96MF4 163 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FRMD6Q96NE9 622 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TMEM74Q96NL1 305 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FIZ1Q96SL8 496 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNF670Q9BS34 389 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 WNT8AQ9H1J5 351 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NTN4Q9HB63 628 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CAPN10Q9HC96 672 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ANO2Q9NQ90 1003 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ARHGEF4Q9NR80 690 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 KCNQ5Q9NR82 932 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TMEM45AQ9NWC5 275 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ANAPC4Q9UJX5 808 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NEU3Q9UQ49 428 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SH2B3Q9UQQ2 575 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CHTOPQ9Y3Y2 248 aaKnown RBP-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PNPLA7Q6ZV29 1317 aa-0.49□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MYO16Q9Y6X6 1858 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SAA2-SAA4A0A096LPE2 208 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 A0A0A6YYJ9 748 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 A0A1W2PP11 408 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 H3BRB1 525 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 J3QKU1 62 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NPC1O15118 1278 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MAFGO15525 162 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SPRY3O43610 288 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 RAD21O60216 631 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 EXOC3O60645 756 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SLITRK3O94933 977 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TJP3O95049 919 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ATG7O95352 703 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 LY86O95711 162 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 POMCP01189 267 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 IGKV1-17P01599 117 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SOD2P04179 222 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PATE4P0C8F1 98 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNF853P0CG23 659 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 IMPDH2P12268 514 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ENGP17813 658 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 UBA1P22314 1058 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 EIF4BP23588 611 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SLC6A2P23975 617 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GUCY2CP25092 1073 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PGFP49763 221 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNF165P49910 485 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ST13P50502 369 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GFRA1P56159 465 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 KRTAP12-1P59990 96 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 RAP2BP61225 183 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ABATP80404 500 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NDPQ00604 133 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SLC7A5Q01650 507 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SLC6A3Q01959 620 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SLFN5Q08AF3 891 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SREBF2Q12772 1141 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GRSF1Q12849 480 aaKnown RBP eCLIP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GPS2Q13227 327 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SNTA1Q13424 505 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms