RNA–Protein interactions for RNA: ENST00000517114.1

SCARNA16.5-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.5-201ENST00000517114 FTH1P19P0C7X4 201 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TGFB3P10600 412 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CTSAP10619 480 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KRT10P13645 584 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TYRP14679 529 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CPEP16870 476 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KCNA3P22001 575 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TNFRSF8P28908 595 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 HOXA11P31270 313 aaPredicted RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ME1P48163 572 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 DIO1P49895 249 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 HK3P52790 923 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PRKAG1P54619 331 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ADKP55263 362 aaKnown RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 UCP3P55916 312 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SOX8P57073 446 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZXDBP98169 803 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KRT17Q04695 432 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PPATQ06203 517 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 LMAN2Q12907 356 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SLC14A1Q13336 389 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MTX1Q13505 466 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 E2F2Q14209 437 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FAM50AQ14320 339 aaKnown RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KRT81Q14533 505 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PLS1Q14651 629 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 KCNB1Q14721 858 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 LARS2Q15031 903 aaKnown RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TWIST1Q15672 202 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 NPY5RQ15761 445 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PRTGQ2VWP7 1150 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PTCHD3Q3KNS1 767 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TBC1D25Q3MII6 688 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SLC9C1Q4G0N8 1177 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CC2D1BQ5T0F9 858 aaKnown RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 RNF219Q5W0B1 726 aaPredicted RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ATG9BQ674R7 924 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TMEM65Q6PI78 240 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 LVRNQ6Q4G3 990 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 DCDC5Q6ZRR9 648 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CATIPQ7Z7H3 387 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZNF329Q86UD4 541 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PNMA8AQ86V59 439 aaPredicted RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PIM3Q86V86 326 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TMPRSS12Q86WS5 348 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 DDX42Q86XP3 938 aaKnown RBP eCLIP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SFTPA1Q8IWL2 248 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 IZUMO1Q8IYV9 350 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 DCP1BQ8IZD4 617 aaKnown RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ABRAQ8N0Z2 381 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MMP21Q8N119 569 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 B4GALNT2Q8NHY0 566 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZNF398Q8TD17 642 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 BRIX1Q8TDN6 353 aaKnown RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 WIPF2Q8TF74 440 aaPredicted RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 DDX17Q92841 729 aaKnown RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SLC25A28Q96A46 364 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 WDYHV1Q96HA8 205 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZFYVE19Q96K21 471 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 NLRP4Q96MN2 994 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SLITRK1Q96PX8 696 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 FYTTD1Q96QD9 318 aaKnown RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 P2RX7Q99572 595 aaKnown RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SMAD5Q99717 465 aaKnown RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZPBPQ9BS86 351 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 C17orf80Q9BSJ5 609 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 WDCPQ9H6R7 721 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MLXIPQ9HAP2 919 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TRMT13Q9NUP7 481 aaKnown RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PNPOQ9NVS9 261 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SLC5A4Q9NY91 659 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PI4KBQ9UBF8 816 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 XPR1Q9UBH6 696 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 STAP2Q9UGK3 403 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 CPA4Q9UI42 421 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 AMFRQ9UKV5 643 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PCDHA6Q9UN73 950 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SHOC2Q9UQ13 582 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ZSCAN21Q9Y5A6 473 aaPredicted RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 HS3ST3B1Q9Y662 390 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SIRT4Q9Y6E7 314 aaPredicted RBP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PHLDB1Q86UU1 1377 aa0.69□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TTBK1Q5TCY1 1321 aaPredicted RBP0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 IGLV5-39A0A0G2JS06 123 aa0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TMEM272A0A1B0GTI8 110 aa0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 LOC105378220A0A1B0GUY1 285 aaPredicted RBP0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 A0A1W2PPC1 479 aa0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SHTN1A0MZ66 631 aa0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 C2CD4BA6NLJ0 364 aa0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 TMEM233B4DJY2 109 aa0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 BTBD19C9JJ37 291 aa0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 GABRDO14764 452 aa0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SPRY2O43597 315 aa0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 DTNBO60941 627 aa0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SRGAP2O75044 1071 aa0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 PMPCBO75439 489 aa0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 ARIH2O95376 493 aa0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 SYF2O95926 243 aaKnown RBP0.68□□□□□ -2.3
SCARNA16.5-201ENST00000517114 MT-CO3P00414 261 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms