RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 MED15Q96RN5 788 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 TTPALQ9BTX7 342 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 HERC2P3Q9BVR0 1158 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 VN1R3Q9BXE9 311 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 NSUN3Q9H649 340 aaKnown RBP6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 TLE6Q9H808 572 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 AVENQ9NQS1 362 aaPredicted RBP6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 ST7Q9NRC1 585 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 CHST7Q9NS84 486 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 NXF1Q9UBU9 619 aaKnown RBP6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 STK39Q9UEW8 545 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 KLF15Q9UIH9 416 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 NAGPAQ9UK23 515 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 ITGA11Q9UKX5 1188 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 NFE2L3Q9Y4A8 694 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 PCDHGC5Q9Y5F6 944 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 TIMM13Q9Y5L4 95 aaPredicted RBP6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 SNX9Q9Y5X1 595 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 MTCH2Q9Y6C9 303 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 PTPRJQ12913 1337 aa6.22□□□□□ -1.41
SCARNA6.1-201ENST00000516989 MYO7AQ13402 2215 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TRIP11Q15643 1979 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ARHGEF37A1IGU5 675 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SMTNL1A8MU46 457 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 BECN2A8MW95 431 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PES1O00541 588 aaKnown RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 FSCN2O14926 492 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SYN3O14994 580 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 HUS1O60921 280 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 IMPDH2P12268 514 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SNRPBP14678 240 aaKnown RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 RPL17P18621 184 aaKnown RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 POU3F3P20264 500 aaPredicted RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PAX3P23760 479 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TKTP29401 623 aaKnown RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GTF2H1P32780 548 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ADH7P40394 386 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MTIF2P46199 727 aaKnown RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 NRIP1P48552 1158 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GLUD2P49448 558 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ARPP19P56211 112 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MYL6P60660 151 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TNNC1P63316 161 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 DSG1Q02413 1049 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ZNF252P-AS1Q0IIN9 211 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CETN1Q12798 172 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LAPTM4AQ15012 233 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PSMD5Q16401 504 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SGSM1Q2NKQ1 1148 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 WDR72Q3MJ13 1102 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ZSCAN23Q3MJ62 389 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ZACNQ401N2 412 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 RTP2Q5QGT7 225 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 C1orf220Q5T0J3 134 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TDRD10Q5VZ19 366 aaKnown RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 KRT39Q6A163 491 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PRSS55Q6UWB4 352 aaPredicted RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 C11orf57Q6ZUT1 292 aaPredicted RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 METTL23Q86XA0 190 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PALB2Q86YC2 1186 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LRRC52Q8N7C0 313 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 OR6P1Q8NGX9 317 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LNX1Q8TBB1 728 aaPredicted RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ELMO3Q96BJ8 720 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CNOT6LQ96LI5 555 aaKnown RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 KLHL5Q96PQ7 755 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MMS19Q96T76 1030 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 LPIN3Q9BQK8 851 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ZBP1Q9H171 429 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 THAP9Q9H5L6 903 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TMEM8AQ9HCN3 771 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SAMSN1Q9NSI8 373 aaKnown RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 FANCLQ9NW38 375 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ACTR10Q9NZ32 417 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GMPR2Q9P2T1 348 aaKnown RBP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 SIX4Q9UIU6 781 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 GBF1Q92538 1859 aa6.21□□□□□ -1.42
SCARNA6.1-201ENST00000516989 COL4A6Q14031 1691 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 RANBP2P49792 3224 aaKnown RBP6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CITO14578 2027 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ADARB2-AS1A8MUL3 147 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 KCNJ18B7U540 433 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 H7C4K7 107 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 M0QZQ0 153 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CLASP2O75122 1294 aaKnown RBP6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 VNN1O95497 513 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 EFEMP2O95967 443 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 HLA-DRAP01903 254 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 CNPP09543 421 aaKnown RBP6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ODC1P11926 461 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 TYMPP19971 482 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MX2P20592 715 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 ATICP31939 592 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 OR1D2P34982 312 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 PIK3CAP42336 1068 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MXI1P50539 228 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 MYL7Q01449 175 aa6.2□□□□□ -1.42
SCARNA6.1-201ENST00000516989 RPL6Q02878 288 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms