RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 ZBTB25P24278 435 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 TBXAS1P24557 533 aaPredicted RBP0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 CDC25CP30307 473 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 RANGAP1P46060 587 aaPredicted RBP0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 PXNP49023 591 aaPredicted RBP0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 COPB1P53618 953 aaKnown RBP0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 MANFP55145 182 aaKnown RBP0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 POU6F2P78424 691 aaPredicted RBP0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 PSG6Q00889 435 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 CREMQ03060 361 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 SEPT2Q15019 361 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 RBBP5Q15291 538 aaKnown RBP0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 ST3GAL2Q16842 350 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 DACT2Q5SW24 774 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 HNRNPLLQ8WVV9 542 aaKnown RBP0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 ADAMTS14Q8WXS8 1223 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 TRMT61AQ96FX7 289 aaKnown RBP0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 SCMH1Q96GD3 660 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 LINC00167Q96N53 147 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 IPO9Q96P70 1041 aaKnown RBP0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 DUX3Q96PT4 197 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 SMOQ99835 787 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 DHRS4Q9BTZ2 278 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 CDK19Q9BWU1 502 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 CAPN10Q9HC96 672 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 HIF1ANQ9NWT6 349 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 TFCP2L1Q9NZI6 479 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 PFDN2Q9UHV9 154 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 SERTAD3Q9UJW9 196 aa0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 AHNAKQ09666 5890 aaKnown RBP0.36□□□□□ -2.35
RNU6-557P-201ENST00000516842 CROCCQ5TZA2 2017 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 BTBD19C9JJ37 291 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 GRM6O15303 877 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 TGM5O43548 720 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 TLR5O60602 858 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 MT-CO3P00414 261 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 FCGR1AP12314 374 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 ATP2A2P16615 1042 aaKnown RBP0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 ZNF12P17014 697 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 ITGALP20701 1170 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 ITGB8P26012 769 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 RFX2P48378 723 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 TOB1P50616 345 aaPredicted RBP0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 ATP8B2P98198 1209 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 Q0VFX4 171 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 LRRC32Q14392 662 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 TBC1D25Q3MII6 688 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 CT83Q5H943 113 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 EARS2Q5JPH6 523 aaKnown RBP0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 TMEM65Q6PI78 240 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 CTU1Q7Z7A3 348 aaKnown RBP0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 UBE2Q1Q7Z7E8 422 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 NLGN4YQ8NFZ3 816 aaPredicted RBP0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 LRRC8CQ8TDW0 803 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 GIPC2Q8TF65 315 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 FAM222BQ8WU58 562 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 INPP5DQ92835 1189 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 RAB24Q969Q5 203 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 IGSF21Q96ID5 467 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 UHRF2Q96PU4 802 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 PIMREGQ9BSJ6 248 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 C11orf54Q9H0W9 315 aaPredicted RBP0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 ZSWIM4Q9H7M6 989 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 MLXIPLQ9NP71 852 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 METTL5Q9NRN9 209 aaKnown RBP0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 ETAA1Q9NY74 926 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 B4GALT6Q9UBX8 382 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 SH2B3Q9UQQ2 575 aa0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 EPB41L3Q9Y2J2 1087 aaPredicted RBP0.35□□□□□ -2.35
RNU6-557P-201ENST00000516842 AGRNO00468 2067 aa0.34□□□□□ -2.35
RNU6-557P-201ENST00000516842 MDN1Q9NU22 5596 aa0.34□□□□□ -2.35
RNU6-557P-201ENST00000516842 A6NNC1 897 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 BECN2A8MW95 431 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 TEX33O43247 280 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 DNAJC8O75937 253 aaPredicted RBP0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 TJP3O95049 919 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 VNN1O95497 513 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 EGFP01133 1207 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 SSBP05455 408 aaKnown RBP eCLIP0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 WEE2P0C1S8 567 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 RNF224P0DH78 156 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 CHRNB1P11230 501 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 CPA1P15085 419 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 ATF4P18848 351 aaPredicted RBP0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 DDCP20711 480 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 CEACAM8P31997 349 aaPredicted RBP0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 FXR1P51114 621 aaKnown RBP eCLIP0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 TPTEP56180 551 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 ABATP80404 500 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF460Q14592 562 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 SLC39A14Q15043 492 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 CYP1B1Q16678 543 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZC2HC1BQ5TFG8 222 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF343Q6P1L6 599 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 FAM198BQ6UWH4 519 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 STXBP4Q6ZWJ1 553 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 ADGRA1Q86SQ6 560 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 DDX53Q86TM3 631 aaKnown RBP0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 METTL16Q86W50 562 aaKnown RBP0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 ST13P5Q8NFI4 369 aaPredicted RBP0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms