RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 C2orf78A6NCI8 922 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 NPR3P17342 541 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 PFKPQ01813 784 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 MYL5Q02045 173 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 FCHO2Q0JRZ9 810 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 KCNMA1Q12791 1236 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 CNGA2Q16280 664 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 SLC44A4Q53GD3 710 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 SGO2Q562F6 1265 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 DPY19L2P1Q6NXN4 242 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 ENOSF1Q7L5Y1 443 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 ARL14EPQ8N8R7 260 aaPredicted RBP11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 PDZD8Q8NEN9 1154 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 TFAP2BQ92481 460 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 IRF7Q92985 503 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 USP13Q92995 863 aaPredicted RBP11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 SLC22A12Q96S37 553 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 RNF38Q9H0F5 515 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 FBXL21Q9UKT6 434 aa11.79□□□□□ -0.52
SCARNA20-201ENST00000516768 PTPRDP23468 1912 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 TRAV19A0A0A6YYK7 116 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 ZNF263O14978 683 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 CHADO15335 359 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 PRAMEF12O95522 483 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 PDGFBP01127 241 aaPredicted RBP11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 USP17L7P0C7H9 530 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 ZDHHC11BP0C7U3 371 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 GDI1P31150 447 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 PDE6CP51160 858 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 KIF11P52732 1056 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 STARD6P59095 220 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 APBA1Q02410 837 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 GRM2Q14416 872 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 ZNF268Q14587 947 aaPredicted RBP11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 NCAPHQ15003 741 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 SKOR2Q2VWA4 1001 aaPredicted RBP11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 PKDCCQ504Y2 493 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 RAB41Q5JT25 222 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 IER5LQ5T953 404 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 GJB7Q6PEY0 223 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 LCLAT1Q6UWP7 414 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 TTC30AQ86WT1 665 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 SIX5Q8N196 739 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 FBXL6Q8N531 539 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 BPIFB1Q8TDL5 484 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 FBXO32Q969P5 355 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 BPIFA3Q9BQP9 254 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 ZSWIM1Q9BR11 485 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 FUCA2Q9BTY2 467 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 NAT10Q9H0A0 1025 aaKnown RBP11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 SMG9Q9H0W8 520 aaKnown RBP11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 HSD3B7Q9H2F3 369 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 BRD9Q9H8M2 597 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 SIX2Q9NPC8 291 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 THG1LQ9NWX6 298 aaKnown RBP11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 APEX2Q9UBZ4 518 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 SCML2Q9UQR0 700 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 CCL26Q9Y258 94 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 USP3Q9Y6I4 520 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 NCANO14594 1321 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 GREB1Q4ZG55 1949 aa11.78□□□□□ -0.52
SCARNA20-201ENST00000516768 ARNTLO00327 626 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 O00370 1275 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 OLFM2O95897 454 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 ABL1P00519 1130 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 OAS1P00973 400 aaKnown RBP11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 CD19P15391 556 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 TCF3P15923 654 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 ZNF18P17022 549 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 PGFP49763 221 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 CLCN5P51795 746 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 ZNF132P52740 706 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 MLLT6P55198 1093 aaPredicted RBP11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 SLC8A3P57103 927 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 ZXDBP98169 803 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 IFRD2Q12894 506 aaPredicted RBP11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 KRT31Q15323 416 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 STILQ15468 1287 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 ANO6Q4KMQ2 910 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 ARHGAP29Q52LW3 1261 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 GPRIN1Q7Z2K8 1008 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 PIGZQ86VD9 579 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 YAF2Q8IY57 180 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 RBBP8NLQ8NC74 664 aaPredicted RBP11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 SLC35F5Q8WV83 523 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 DNASE1L2Q92874 299 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 SHDQ96IW2 340 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 VPS16Q9H269 839 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 KIF9Q9HAQ2 790 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 TRPC7Q9HCX4 862 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 TLR8Q9NR97 1041 aaKnown RBP11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 GKN1Q9NS71 199 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 HESX1Q9UBX0 185 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 LIMA1Q9UHB6 759 aaKnown RBP11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 TSPAN16Q9UKR8 245 aa11.77□□□□□ -0.53
SCARNA20-201ENST00000516768 SMTNL1A8MU46 457 aa11.76□□□□□ -0.53
SCARNA20-201ENST00000516768 BECN2A8MW95 431 aa11.76□□□□□ -0.53
SCARNA20-201ENST00000516768 FOXN3O00409 490 aaPredicted RBP11.76□□□□□ -0.53
SCARNA20-201ENST00000516768 PES1O00541 588 aaKnown RBP11.76□□□□□ -0.53
SCARNA20-201ENST00000516768 XPO1O14980 1071 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 1118.9 ms