RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 PPM1DO15297 605 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 TBC1D4O60343 1298 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 IL6RP08887 468 aaPredicted RBP3.96□□□□□ -1.78
HERC4-215ENST00000515753 DRD4P21917 467 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 KCNA3P22001 575 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 EPHB2P29323 1055 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 PTGER1P34995 402 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 CCT8P50990 548 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 TUBA4AP68366 448 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 HLTFQ14527 1009 aaKnown RBP eCLIP3.96□□□□□ -1.78
HERC4-215ENST00000515753 TBCCQ15814 346 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 CNGA2Q16280 664 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 ZIK1Q3SY52 487 aaPredicted RBP3.96□□□□□ -1.78
HERC4-215ENST00000515753 ARHGAP40Q5TG30 622 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 SUMO4Q6EEV6 95 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 RGS7BPQ6MZT1 257 aaPredicted RBP3.96□□□□□ -1.78
HERC4-215ENST00000515753 MAVSQ7Z434 540 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 ZNF804AQ7Z570 1209 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 YTHDF3Q7Z739 585 aaKnown RBP3.96□□□□□ -1.78
HERC4-215ENST00000515753 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.96□□□□□ -1.78
HERC4-215ENST00000515753 SLC15A4Q8N697 577 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 SOCS4Q8WXH5 440 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 WASF1Q92558 559 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 TBC1D5Q92609 795 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 TTC17Q96AE7 1141 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 QTRT1Q9BXR0 403 aaKnown RBP3.96□□□□□ -1.78
HERC4-215ENST00000515753 BHMT2Q9H2M3 363 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 DKK3Q9UBP4 350 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 SERTAD3Q9UJW9 196 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 USP19O94966 1318 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 FRMPD2Q68DX3 1309 aaPredicted RBP3.95□□□□□ -1.78
HERC4-215ENST00000515753 EIF4G1Q04637 1599 aaKnown RBP3.95□□□□□ -1.78
HERC4-215ENST00000515753 TARM1B6A8C7 271 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 TRIM38O00635 465 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 MGEA5O60502 916 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 NHLRC4P0CG21 123 aaPredicted RBP3.95□□□□□ -1.78
HERC4-215ENST00000515753 CYP2D6P10635 497 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 JUPP14923 745 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 BRAFP15056 766 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 PEX2P28328 305 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 SUPT20HL1Q3ZLR7 823 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 AARS2Q5JTZ9 985 aaKnown RBP3.95□□□□□ -1.78
HERC4-215ENST00000515753 DCAF12L1Q5VU92 463 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 MTHFD1LQ6UB35 978 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 CCDC149Q6ZUS6 474 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 C14orf80Q86SX3 495 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 SLC15A3Q8IY34 581 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 OR56A3Q8NH54 315 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 RP9Q8TA86 221 aaKnown RBP3.95□□□□□ -1.78
HERC4-215ENST00000515753 PMM1Q92871 262 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 SPSB4Q96A44 273 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 RSPRY1Q96DX4 576 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 PPP1R9BQ96SB3 815 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 MS4A7Q9GZW8 240 aaPredicted RBP3.95□□□□□ -1.78
HERC4-215ENST00000515753 NRIP3Q9NQ35 241 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 ARHGEF3Q9NR81 526 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 COL20A1Q9P218 1284 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 BTBD3Q9Y2F9 522 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 CC2D2AQ9P2K1 1620 aa3.95□□□□□ -1.78
HERC4-215ENST00000515753 PYCARD-AS1I3L0S3 204 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 M0R3H8 397 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 KCNAB3O43448 404 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 PLIN1O60240 522 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 LATS1O95835 1130 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 HOXB6P17509 224 aaKnown RBP3.94□□□□□ -1.78
HERC4-215ENST00000515753 SUMO3P55854 103 aaPredicted RBP3.94□□□□□ -1.78
HERC4-215ENST00000515753 FMO1Q01740 532 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 KRT17Q04695 432 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 GPR162Q16538 588 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 INSCQ1MX18 579 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 KIAA0753Q2KHM9 967 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 PLA1AQ53H76 456 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 CEP78Q5JTW2 689 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 CERCAMQ5T4B2 595 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 SLC2A7Q6PXP3 512 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 NEK8Q86SG6 692 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 ZNF280BQ86YH2 543 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 BPIFB1Q8TDL5 484 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 FSD1LQ9BXM9 530 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 GLOD4Q9HC38 313 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 TRMT13Q9NUP7 481 aaKnown RBP3.94□□□□□ -1.78
HERC4-215ENST00000515753 ZSCAN32Q9NX65 697 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 DLL3Q9NYJ7 618 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 SH3BP4Q9P0V3 963 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 DNMT3BQ9UBC3 853 aaKnown RBP3.94□□□□□ -1.78
HERC4-215ENST00000515753 CDY1Q9Y6F8 540 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 SCRIBQ14160 1630 aa3.94□□□□□ -1.78
HERC4-215ENST00000515753 FNDC1Q4ZHG4 1894 aaPredicted RBP3.94□□□□□ -1.78
HERC4-215ENST00000515753 LOC102723971A0A1B0GUV8 181 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 H0YIZ8 118 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 SMIM22K7EJ46 135 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 CAND2O75155 1236 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 MOSPD3O75425 235 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 TXNP10599 105 aaKnown RBP3.93□□□□□ -1.78
HERC4-215ENST00000515753 IL1R1P14778 569 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 GNALP38405 381 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 LIPAP38571 399 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 ALDH9A1P49189 494 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 BCAT1P54687 386 aa3.93□□□□□ -1.78
HERC4-215ENST00000515753 RHBDL3P58872 404 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms