RNA–Protein interactions for RNA: ENST00000515149.2

ATR-208, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-208ENST00000515149 SERTAD4Q9NUC0 356 aa4.73□□□□□ -1.65
ATR-208ENST00000515149 LMBRD1Q9NUN5 540 aa4.73□□□□□ -1.65
ATR-208ENST00000515149 STK32BQ9NY57 414 aa4.73□□□□□ -1.65
ATR-208ENST00000515149 EHD3Q9NZN3 535 aa4.73□□□□□ -1.65
ATR-208ENST00000515149 SERGEFQ9UGK8 458 aa4.73□□□□□ -1.65
ATR-208ENST00000515149 THRAP3Q9Y2W1 955 aaKnown RBP4.73□□□□□ -1.65
ATR-208ENST00000515149 PCDHA1Q9Y5I3 950 aa4.73□□□□□ -1.65
ATR-208ENST00000515149 RAD54BQ9Y620 910 aa4.73□□□□□ -1.65
ATR-208ENST00000515149 DHX57Q6P158 1386 aaKnown RBP4.73□□□□□ -1.65
ATR-208ENST00000515149 SPATA31E1Q6ZUB1 1445 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 PEAK1Q9H792 1746 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 KAT6AQ92794 2004 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 GCOM1H8Y6P7 765 aaPredicted RBP4.72□□□□□ -1.65
ATR-208ENST00000515149 M0QYG6 137 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 PPM1DO15297 605 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 TTLL1O95922 423 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 ZFXP17010 805 aaPredicted RBP4.72□□□□□ -1.65
ATR-208ENST00000515149 ITGALP20701 1170 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 ZNF134P52741 427 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 NKX6-1P78426 367 aaPredicted RBP4.72□□□□□ -1.65
ATR-208ENST00000515149 EXOSC9Q06265 439 aaKnown RBP4.72□□□□□ -1.65
ATR-208ENST00000515149 GPR162Q16538 588 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 THEMIS2Q5TEJ8 643 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 PTF1AQ7RTS3 328 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.72□□□□□ -1.65
ATR-208ENST00000515149 NGDNQ8NEJ9 315 aaKnown RBP4.72□□□□□ -1.65
ATR-208ENST00000515149 KLHDC4Q8TBB5 520 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 FEZ2Q9UHY8 353 aaPredicted RBP4.72□□□□□ -1.65
ATR-208ENST00000515149 COL5A2P05997 1499 aaPredicted RBP4.72□□□□□ -1.65
ATR-208ENST00000515149 LMO7Q8WWI1 1683 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 RGPD8O14715 1765 aaPredicted RBP4.72□□□□□ -1.65
ATR-208ENST00000515149 CRB1P82279 1406 aa4.72□□□□□ -1.65
ATR-208ENST00000515149 CPDO75976 1380 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 LOC105371045A0A1W2PR82 267 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 DCLK1O15075 740 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 SOAT2O75908 522 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 DNAJB5O75953 348 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 PRKCGP05129 697 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 HNRNPCP07910 306 aaKnown RBP eCLIP4.71□□□□□ -1.66
ATR-208ENST00000515149 EBLN1P0CF75 366 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 PIM1P11309 404 aaPredicted RBP4.71□□□□□ -1.66
ATR-208ENST00000515149 HDCP19113 662 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 CCT8P50990 548 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 SP2Q02086 613 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 EIF2B5Q13144 721 aaKnown RBP4.71□□□□□ -1.66
ATR-208ENST00000515149 PLS1Q14651 629 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 PGS1Q32NB8 556 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 FAM153CQ494X1 144 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 TMEM108Q6UXF1 575 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 ZNF782Q6ZMW2 699 aaPredicted RBP4.71□□□□□ -1.66
ATR-208ENST00000515149 C1QL2Q7Z5L3 287 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 CELF5Q8N6W0 485 aaKnown RBP4.71□□□□□ -1.66
ATR-208ENST00000515149 FAM46DQ8NEK8 389 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 HSPBAP1Q96EW2 488 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 ZNF778Q96MU6 729 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 PNPOQ9NVS9 261 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 RNF7Q9UBF6 113 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 HESX1Q9UBX0 185 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 PADI4Q9UM07 663 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 LUC7L2Q9Y383 392 aaKnown RBP4.71□□□□□ -1.66
ATR-208ENST00000515149 CHD4Q14839 1912 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 BCL9O00512 1426 aa4.71□□□□□ -1.66
ATR-208ENST00000515149 TOPAZ1Q8N9V7 1692 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 ITSN1Q15811 1721 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 ZNF213O14771 459 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 DTNBO60941 627 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 IL33O95760 270 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 ERBB2P04626 1255 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 NHLRC4P0CG21 123 aaPredicted RBP4.7□□□□□ -1.66
ATR-208ENST00000515149 HSPA6P17066 643 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 BMPR2Q13873 1038 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 SLC15A2Q16348 729 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 FAM160B1Q5W0V3 765 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 ZNF551Q7Z340 670 aaPredicted RBP4.7□□□□□ -1.66
ATR-208ENST00000515149 MAVSQ7Z434 540 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 CHMP4CQ96CF2 233 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 REPS1Q96D71 796 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 MVB12AQ96EY5 273 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 GPATCH3Q96I76 525 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 SLC46A1Q96NT5 459 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 C1QTNF7Q9BXJ2 289 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 SIK2Q9H0K1 926 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 HOMER2Q9NSB8 354 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 PAPPAQ13219 1627 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 ATP10DQ9P241 1426 aa4.7□□□□□ -1.66
ATR-208ENST00000515149 WDR91A4D1P6 747 aa4.69□□□□□ -1.66
ATR-208ENST00000515149 LINC01548A6NM66 108 aa4.69□□□□□ -1.66
ATR-208ENST00000515149 TARM1B6A8C7 271 aa4.69□□□□□ -1.66
ATR-208ENST00000515149 GNAI2P04899 355 aa4.69□□□□□ -1.66
ATR-208ENST00000515149 LIPAP38571 399 aa4.69□□□□□ -1.66
ATR-208ENST00000515149 TMEM119Q4V9L6 283 aa4.69□□□□□ -1.66
ATR-208ENST00000515149 EMC10Q5UCC4 262 aa4.69□□□□□ -1.66
ATR-208ENST00000515149 DTX2Q86UW9 622 aa4.69□□□□□ -1.66
ATR-208ENST00000515149 PCSK9Q8NBP7 692 aaKnown RBP4.69□□□□□ -1.66
ATR-208ENST00000515149 SEMA6DQ8NFY4 1073 aa4.69□□□□□ -1.66
ATR-208ENST00000515149 PLBD2Q8NHP8 589 aa4.69□□□□□ -1.66
ATR-208ENST00000515149 FAM167AQ96KS9 214 aa4.69□□□□□ -1.66
ATR-208ENST00000515149 SLC29A3Q9BZD2 475 aa4.69□□□□□ -1.66
ATR-208ENST00000515149 TTYH3Q9C0H2 523 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms