RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 USP3Q9Y6I4 520 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 ANAPC1Q9H1A4 1944 aa12.64□□□□□ -0.39
PDLIM5-220ENST00000514830 PRRG1O14668 218 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 AKR1B10O60218 316 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 RTN3O95197 1032 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 NDUFA10O95299 355 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 C8AP07357 584 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 CSH1P0DML2 217 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 CSH2P0DML3 217 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 IGFBP4P22692 258 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 SCNN1AP37088 669 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 NSFP46459 744 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 ALDH1A3P47895 512 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 MAP3K7CLP57077 242 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 HYAL1Q12794 435 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 PTP4A2Q12974 167 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 CTC1Q2NKJ3 1217 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 MGAT5BQ3V5L5 792 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 TCEAL5Q5H9L2 206 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 LIN9Q5TKA1 542 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 NAA35Q5VZE5 725 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 PM20D1Q6GTS8 502 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 ALKBH5Q6P6C2 394 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 MON1BQ7L1V2 547 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 ZDHHC17Q8IUH5 632 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 GPIHBP1Q8IV16 184 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 NUP93Q8N1F7 819 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 C1orf131Q8NDD1 294 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 CASP10Q92851 521 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 FAM122AQ96E09 287 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 PPP1R13BQ96KQ4 1090 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 KCNK16Q96T55 309 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 MAN1C1Q9NR34 630 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 INTUQ9ULD6 942 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 SLC27A5Q9Y2P5 690 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 EPN1Q9Y6I3 576 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 C2orf16Q68DN1 1984 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 CDH23Q9H251 3354 aa12.63□□□□□ -0.39
PDLIM5-220ENST00000514830 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 SOWAHDA6NJG2 315 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 TULP2O00295 520 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 PER2O15055 1255 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 GABBR2O75899 941 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 FBXO21O94952 628 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 CALB1P05937 261 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 PTMAP06454 111 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 SRGAP2BP0DMP2 458 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 MYBL1P10243 752 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 EPCAMP16422 314 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 EPHB3P54753 998 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 ADAM15Q13444 863 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 DDR2Q16832 855 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 PTPN20Q4JDL3 420 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 RAD9BQ6WBX8 426 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 DENND5BQ6ZUT9 1274 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 ARCQ7LC44 396 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 ITIH5Q86UX2 942 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 ERICH1Q86X53 443 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 PASD1Q8IV76 773 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 SCN4BQ8IWT1 228 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 SLC7A14Q8TBB6 771 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 OVCA2Q8WZ82 227 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 IRGQQ8WZA9 623 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 PSMG2Q969U7 264 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 TRIM11Q96F44 468 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 CPXM1Q96SM3 734 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 UHRF1Q96T88 793 aaPredicted RBP12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 SEPT5Q99719 369 aaPredicted RBP12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 C1QTNF1Q9BXJ1 281 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 FBXO44Q9H4M3 255 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 CNGB3Q9NQW8 809 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 WDR35Q9P2L0 1181 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 STRIP2Q9ULQ0 834 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 REV3LO60673 3130 aa12.62□□□□□ -0.39
PDLIM5-220ENST00000514830 SLC38A8A6NNN8 435 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 ZNF263O14978 683 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 SART1O43290 800 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 GLP2RO95838 553 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 LRG1P02750 347 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 FTLP02792 175 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 GLI1P08151 1106 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 HMGA1P17096 107 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 HOXB8P17481 243 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 SSTR3P32745 418 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 PPP3CCP48454 512 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 SLC5A3P53794 718 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 EPHA5P54756 1037 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 GFPT1Q06210 699 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 TWF1Q12792 350 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 ZNF268Q14587 947 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 VEPH1Q14D04 833 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 TCEAL1Q15170 157 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 HS1BP3Q53T59 392 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 PPM1LQ5SGD2 360 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 CCDC122Q5T0U0 273 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 BEND5Q7L4P6 421 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 RBM23Q86U06 439 aaKnown RBP12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 MCOLN2Q8IZK6 566 aa12.61□□□□□ -0.39
PDLIM5-220ENST00000514830 ZNF276Q8N554 614 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms