RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 NXF1Q9UBU9 619 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-217ENST00000513438 EBF1Q9UH73 591 aa14.26□□□□□ -0.13
POLR2J3-217ENST00000513438 PCDHGA5Q9Y5G8 931 aa14.26□□□□□ -0.13
POLR2J3-217ENST00000513438 PTPRDP23468 1912 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 UBE4BO95155 1302 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 PVALEFA0A1B0GWK0 134 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 TM4SF5O14894 197 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 PHACTR2O75167 634 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 ATICP31939 592 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 LIMK1P53667 647 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 SEC13P55735 322 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 IFRD2Q12894 506 aaPredicted RBP14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 CUL4BQ13620 913 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 GAB4Q2WGN9 574 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 C2orf27AQ580R0 203 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 FILIP1Q7Z7B0 1213 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 CCDC26Q8TAB7 109 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 USP33Q8TEY7 942 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 ZNF518BQ9C0D4 1074 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 MAGEF1Q9HAY2 307 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 SMPD4Q9NXE4 827 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 ANGPTL2Q9UKU9 493 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 PCDHA7Q9UN72 937 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 INVSQ9Y283 1065 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 CPQQ9Y646 472 aa14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 CNOT1A5YKK6 2376 aaKnown RBP14.25□□□□□ -0.13
POLR2J3-217ENST00000513438 ACACBO00763 2458 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 HELZP42694 1942 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 SCAMP3O14828 347 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 EXOC3O60645 756 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 RHOBTB1O94844 696 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 STAU1O95793 577 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 OLFM2O95897 454 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 OAS1P00973 400 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 CYP17A1P05093 508 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 MPLP40238 635 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 SLC6A11P48066 632 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 CASP4P49662 377 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 CDH8P55286 799 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 DHCR24Q15392 516 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 ELF2Q15723 593 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 KNOP1Q1ED39 458 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 STPG1Q5TH74 334 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 C12orf56Q8IXR9 622 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 NUP93Q8N1F7 819 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 CCDC33Q8N5R6 958 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 B3GALNT2Q8NCR0 500 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 TSTD1Q8NFU3 115 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 PLEKHO2Q8TD55 490 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 SYAP1Q96A49 352 aaPredicted RBP14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 SLITRK1Q96PX8 696 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 ELOVL4Q9GZR5 314 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 XYLT2Q9H1B5 865 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 VPS45Q9NRW7 570 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 FAM13BQ9NYF5 915 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 CGNQ9P2M7 1197 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 CHORDC1Q9UHD1 332 aaPredicted RBP14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 MYO16Q9Y6X6 1858 aa14.24□□□□□ -0.13
POLR2J3-217ENST00000513438 ABCA7Q8IZY2 2146 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 MYOFQ9NZM1 2061 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 SLC9A3R1O14745 358 aaPredicted RBP14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 MBL2P11226 248 aaPredicted RBP14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 YWHAQP27348 245 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 GBP1P32455 592 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 ME1P48163 572 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 CREB5Q02930 508 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 BMT2Q1RMZ1 405 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 USP39Q53GS9 565 aaKnown RBP14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 N4BP2L1Q5TBK1 243 aaPredicted RBP14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 RESP18Q5W5W9 173 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 RHBDF2Q6PJF5 856 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 KIAA1958Q8N8K9 716 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 PARD3BQ8TEW8 1205 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 ELMO3Q96BJ8 720 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 KCNK16Q96T55 309 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 PNKPQ96T60 521 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 TPSD1Q9BZJ3 242 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 CFAP97Q9P2B7 532 aa14.23□□□□□ -0.13
POLR2J3-217ENST00000513438 BCLAF3A2AJT9 711 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 RTN3O95197 1032 aaPredicted RBP14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 CAVIN2O95810 425 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 C4BPAP04003 597 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 ZSCAN22P10073 491 aaPredicted RBP14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 MRPS21P82921 87 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 MESP2Q0VG99 397 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 BIRC3Q13489 604 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 ZNF667Q5HYK9 610 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 EMC10Q5UCC4 262 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 TCEAL6Q6IPX3 200 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 PAQR9Q6ZVX9 377 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 SFTPA1Q8IWL2 248 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 GRAMD1CQ8IYS0 662 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 SCAMP5Q8TAC9 235 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 TCEAL3Q969E4 200 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 FBXO32Q969P5 355 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 SNX21Q969T3 373 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 MED10Q9BTT4 135 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 SMYD3Q9H7B4 428 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 VRTNQ9H8Y1 702 aa14.22□□□□□ -0.13
POLR2J3-217ENST00000513438 SERTAD1Q9UHV2 236 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms