RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 HMGB4Q8WW32 186 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 ADAMTS14Q8WXS8 1223 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 SPATA17Q96L03 361 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 GTPBP2Q9BX10 602 aaKnown RBP14.91□□□□□ -0.02
SPCS3-204ENST00000513139 GTF3C4Q9UKN8 822 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 L1RE1Q9UN81 338 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 GOLGA4Q13439 2230 aaKnown RBP14.9□□□□□ -0.02
SPCS3-204ENST00000513139 ANKRD63C9JTQ0 380 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 LEFTY2O00292 366 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 ARHGAP33O14559 1287 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 ADAM23O75077 832 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 FAM13AO94988 1023 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 KAT7O95251 611 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 SYPP08247 313 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 PCSK1P29120 753 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 GRIA2P42262 883 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 LHX1P48742 406 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 SLC7A9P82251 487 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 ZXDBP98169 803 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 DHCR24Q15392 516 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 C19orf48Q6RUI8 117 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 FILIP1Q7Z7B0 1213 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 MINDY1Q8N5J2 469 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 FAM184AQ8NB25 1140 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 KCNV2Q8TDN2 545 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 COL26A1Q96A83 441 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 FIZ1Q96SL8 496 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 PLIN2Q99541 437 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 OCEL1Q9H607 264 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 WDR70Q9NW82 654 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 GDAP2Q9NXN4 497 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 EHD2Q9NZN4 543 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 SHROOM3Q8TF72 1996 aa14.9□□□□□ -0.02
SPCS3-204ENST00000513139 ATXN2Q99700 1313 aaKnown RBP14.9□□□□□ -0.02
SPCS3-204ENST00000513139 MYH10P35580 1976 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.89□□□□□ -0.03
SPCS3-204ENST00000513139 GABRDO14764 452 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 PPP3CCP48454 512 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 RPL6Q02878 288 aaKnown RBP14.89□□□□□ -0.03
SPCS3-204ENST00000513139 RESTQ13127 1097 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 POSTNQ15063 836 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 TRIP6Q15654 476 aaKnown RBP14.89□□□□□ -0.03
SPCS3-204ENST00000513139 COL28A1Q2UY09 1125 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 ARL6IP4Q66PJ3 421 aaKnown RBP14.89□□□□□ -0.03
SPCS3-204ENST00000513139 FAM171BQ6P995 826 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 VSTM1Q6UX27 236 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 CRELD2Q6UXH1 353 aaPredicted RBP14.89□□□□□ -0.03
SPCS3-204ENST00000513139 CCNI2Q6ZMN8 369 aaPredicted RBP14.89□□□□□ -0.03
SPCS3-204ENST00000513139 C4orf50Q6ZRC1 276 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 GPBP1Q86WP2 473 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 SFTPA1Q8IWL2 248 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 SCN4BQ8IWT1 228 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 PGBD3Q8N328 593 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 LRRC52Q8N7C0 313 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 ST6GALNAC4Q9H4F1 302 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 CCDC86Q9H6F5 360 aaKnown RBP14.89□□□□□ -0.03
SPCS3-204ENST00000513139 TRPM5Q9NZQ8 1165 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 KALRNO60229 2985 aa14.89□□□□□ -0.03
SPCS3-204ENST00000513139 A0A1W2PQD8 194 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 TCRBV21S2A2A0A5A6 115 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 GJB3O75712 270 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 OLFM2O95897 454 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 ADH1CP00326 375 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 ACAT1P24752 427 aaKnown RBP14.88□□□□□ -0.03
SPCS3-204ENST00000513139 POLR2BP30876 1174 aaKnown RBP14.88□□□□□ -0.03
SPCS3-204ENST00000513139 SLC6A11P48066 632 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 ZNF33AQ06730 810 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 MESP2Q0VG99 397 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 PREPLQ4J6C6 727 aaPredicted RBP14.88□□□□□ -0.03
SPCS3-204ENST00000513139 RILPL1Q5EBL4 403 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 EMC10Q5UCC4 262 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 RHBDF2Q6PJF5 856 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 TRMT11Q7Z4G4 463 aaKnown RBP14.88□□□□□ -0.03
SPCS3-204ENST00000513139 TOP6BLQ8N6T0 577 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 CACTINQ8WUQ7 758 aaKnown RBP14.88□□□□□ -0.03
SPCS3-204ENST00000513139 SNX21Q969T3 373 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 AK8Q96MA6 479 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 TTLL2Q9BWV7 592 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 SCUBE2Q9NQ36 999 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 FSCN3Q9NQT6 498 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 ARHGEF4Q9NR80 690 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 AGAP1Q9UPQ3 857 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 PCDHB9Q9Y5E1 797 aa14.88□□□□□ -0.03
SPCS3-204ENST00000513139 CABIN1Q9Y6J0 2220 aa14.87□□□□□ -0.03
SPCS3-204ENST00000513139 VWA3AA6NCI4 1184 aa14.87□□□□□ -0.03
SPCS3-204ENST00000513139 TISP43B9A030 160 aa14.87□□□□□ -0.03
SPCS3-204ENST00000513139 ITGB3P05106 788 aa14.87□□□□□ -0.03
SPCS3-204ENST00000513139 DENND5BQ6ZUT9 1274 aa14.87□□□□□ -0.03
SPCS3-204ENST00000513139 DPH6Q7L8W6 267 aa14.87□□□□□ -0.03
SPCS3-204ENST00000513139 DDX42Q86XP3 938 aaKnown RBP eCLIP14.87□□□□□ -0.03
SPCS3-204ENST00000513139 C1orf127Q8N9H9 656 aa14.87□□□□□ -0.03
SPCS3-204ENST00000513139 CXorf38Q8TB03 319 aa14.87□□□□□ -0.03
SPCS3-204ENST00000513139 POMGNT1Q8WZA1 660 aa14.87□□□□□ -0.03
SPCS3-204ENST00000513139 SLC39A7Q92504 469 aa14.87□□□□□ -0.03
SPCS3-204ENST00000513139 TBC1D14Q9P2M4 693 aa14.87□□□□□ -0.03
SPCS3-204ENST00000513139 MAGEC2Q9UBF1 373 aaPredicted RBP14.87□□□□□ -0.03
SPCS3-204ENST00000513139 ITGA11Q9UKX5 1188 aa14.87□□□□□ -0.03
SPCS3-204ENST00000513139 KNL1Q8NG31 2342 aa14.87□□□□□ -0.03
SPCS3-204ENST00000513139 KNTC1P50748 2209 aa14.86□□□□□ -0.03
SPCS3-204ENST00000513139 ZNF840PA6NDX5 716 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms