RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 NMRK2Q9NPI5 230 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 AASDHPPTQ9NRN7 309 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 INTUQ9ULD6 942 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 TTC7AQ9ULT0 858 aaPredicted RBP4.41□□□□□ -1.7
VCAN-209ENST00000513016 SNCAIPQ9Y6H5 919 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 INO80Q9ULG1 1556 aaPredicted RBP4.41□□□□□ -1.7
VCAN-209ENST00000513016 COL1A2P08123 1366 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 EVPLLA8MZ36 301 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 RASA4BC9J798 803 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 IRF6O14896 467 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 SPTLC1O15269 473 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 RASA4O43374 803 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 NDUFB5O43674 189 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 CCDC22O60826 627 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 AMD1P17707 334 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 WEE1P30291 646 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 TKTL1P51854 596 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 CCNG2Q16589 344 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 TNIP2Q8NFZ5 429 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 BSNDQ8WZ55 320 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 KCNB2Q92953 911 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 LENG9Q96B70 501 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 RANBP17Q9H2T7 1088 aaKnown RBP4.41□□□□□ -1.7
VCAN-209ENST00000513016 TBC1D14Q9P2M4 693 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 GPN3Q9UHW5 284 aaPredicted RBP4.41□□□□□ -1.7
VCAN-209ENST00000513016 BARX2Q9UMQ3 279 aaPredicted RBP4.41□□□□□ -1.7
VCAN-209ENST00000513016 ABCA6Q8N139 1617 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 NWD1Q149M9 1564 aa4.41□□□□□ -1.7
VCAN-209ENST00000513016 WDR91A4D1P6 747 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 SOWAHDA6NJG2 315 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 RAMP2O60895 175 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 GUCY1B2O75343 617 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 ACSL3O95573 720 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 PGK1P00558 417 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 USP17L7P0C7H9 530 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 TMEM253P0C7T8 217 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 MLNP12872 115 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 BRD2P25440 801 aaKnown RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 BEX3Q00994 111 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 MAPK8IP2Q13387 824 aaPredicted RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 NLRP9Q7RTR0 991 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 SYTL1Q8IYJ3 562 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 CCDC126Q96EE4 140 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 MRPL48Q96GC5 212 aaKnown RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 CEP19Q96LK0 163 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 GOLPH3LQ9H4A5 285 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 A1CFQ9NQ94 594 aaKnown RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 RPS6KB2Q9UBS0 482 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 ZMYM5Q9UJ78 669 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 APPL1Q9UKG1 709 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 USP18Q9UMW8 372 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 QSOX1O00391 747 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 SMIM10L2AP0DMW4 78 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 SMIM10L2BP0DMW5 78 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 ITIH2P19823 946 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 CYP2A7P20853 494 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 CXCR5P32302 372 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 PMS2P54278 862 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 BCL2L1Q07817 233 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 GRIK3Q13003 919 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 KRT80Q6KB66 452 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 KLHL35Q6PF15 583 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 CCDC137Q6PK04 289 aaKnown RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 EPM2AIP1Q7L775 607 aaPredicted RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 CHMP1BQ7LBR1 199 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 C1orf131Q8NDD1 294 aaKnown RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 MYRIPQ8NFW9 859 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 SPATA18Q8TC71 538 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 HASPINQ8TF76 798 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 COG1Q8WTW3 980 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 MYCBPQ99417 103 aaPredicted RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 FAM167BQ9BTA0 163 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 ABCG4Q9H172 646 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 ATP13A1Q9HD20 1204 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 PPARGC1AQ9UBK2 798 aaKnown RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 DDX20Q9UHI6 824 aaKnown RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 NOVA2Q9UNW9 492 aaKnown RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 DUSP11O75319 330 aaKnown RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 SRP72O76094 671 aaKnown RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 SERPINF2P08697 491 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 ITGB6P18564 788 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 JAK1P23458 1154 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 KLRK1P26718 216 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 ATP1A2P50993 1020 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 GFPT1Q06210 699 aaPredicted RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 BHMTQ93088 406 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 PLEKHA8Q96JA3 519 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 TMEM237Q96Q45 408 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 CNPY3Q9BT09 278 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 C2orf49Q9BVC5 232 aaPredicted RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 GANQ9H2C0 597 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 TMEM60Q9H2L4 133 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 FANCEQ9HB96 536 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 RPRD1BQ9NQG5 326 aaKnown RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 SAE1Q9UBE0 346 aaPredicted RBP4.4□□□□□ -1.7
VCAN-209ENST00000513016 SNX5Q9Y5X3 404 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 RIC1Q4ADV7 1423 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 CBX4O00257 560 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 APRTP07741 180 aa4.4□□□□□ -1.7
VCAN-209ENST00000513016 OR56A5P0C7T3 313 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms