RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 PMPCBO75439 489 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 TUSC2O75896 110 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 PDGFRBP09619 1106 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 CT47B1P0C2W7 299 aaPredicted RBP2.86□□□□□ -1.95
PDGFC-208ENST00000512711 IL1R2P27930 398 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 PTGER1P34995 402 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 PRKAG1P54619 331 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 TPTEP56180 551 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 WNT3P56703 355 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 SLC13A2Q13183 592 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 PIN1Q13526 163 aaPredicted RBP2.86□□□□□ -1.95
PDGFC-208ENST00000512711 SEC23BQ15437 767 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 MGAT5BQ3V5L5 792 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 DCAF12L1Q5VU92 463 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 LMBRD2Q68DH5 695 aaPredicted RBP2.86□□□□□ -1.95
PDGFC-208ENST00000512711 SERPINA13PQ6UXR4 307 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 IRF2BP2Q7Z5L9 587 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 TECPR1Q7Z6L1 1165 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 MICU3Q86XE3 530 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 DNAJB14Q8TBM8 379 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 KBTBD7Q8WVZ9 684 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 EFHD1Q9BUP0 239 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 BRINP2Q9C0B6 783 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 PNMA8BQ9ULN7 279 aaPredicted RBP2.86□□□□□ -1.95
PDGFC-208ENST00000512711 THRAP3Q9Y2W1 955 aaKnown RBP2.86□□□□□ -1.95
PDGFC-208ENST00000512711 AFG3L2Q9Y4W6 797 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 ANKRD62A6NC57 917 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 AGPSO00116 658 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 CES2O00748 559 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 SPRY2O43597 315 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 CTNND1O60716 968 aaKnown RBP2.85□□□□□ -1.95
PDGFC-208ENST00000512711 BMP15O95972 392 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 XRCC6P12956 609 aaKnown RBP eCLIP2.85□□□□□ -1.95
PDGFC-208ENST00000512711 ATF7P17544 494 aaPredicted RBP2.85□□□□□ -1.95
PDGFC-208ENST00000512711 UQCRC1P31930 480 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 GKP32189 559 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 MMP13P45452 471 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 COPB1P53618 953 aaKnown RBP2.85□□□□□ -1.95
PDGFC-208ENST00000512711 ITGA8P53708 1063 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 SUMO3P55854 103 aaPredicted RBP2.85□□□□□ -1.95
PDGFC-208ENST00000512711 LMAN2Q12907 356 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 MLC1Q15049 377 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 LRRC41Q15345 812 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 TRIP6Q15654 476 aaKnown RBP2.85□□□□□ -1.95
PDGFC-208ENST00000512711 NPY5RQ15761 445 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 FAM187BQ17R55 369 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 ANO6Q4KMQ2 910 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 MEX3CQ5U5Q3 659 aaKnown RBP2.85□□□□□ -1.95
PDGFC-208ENST00000512711 ZNF783Q6ZMS7 281 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 SIRT6Q8N6T7 355 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 NRACQ8N912 160 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 OR6B3Q8NGW1 331 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 ADAMTS18Q8TE60 1221 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 AIFM3Q96NN9 605 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 MMS19Q96T76 1030 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 B3GNT5Q9BYG0 378 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 C22orf23Q9BZE7 217 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 AS3MTQ9HBK9 375 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 XPNPEP3Q9NQH7 507 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 CNNM1Q9NRU3 951 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 TRMT13Q9NUP7 481 aaKnown RBP2.85□□□□□ -1.95
PDGFC-208ENST00000512711 TUBA8Q9NY65 449 aaPredicted RBP2.85□□□□□ -1.95
PDGFC-208ENST00000512711 ZIM2Q9NZV7 527 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 AMFRQ9UKV5 643 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 ASAP1Q9ULH1 1129 aa2.85□□□□□ -1.95
PDGFC-208ENST00000512711 NOB1Q9ULX3 412 aaKnown RBP2.85□□□□□ -1.95
PDGFC-208ENST00000512711 DRG1Q9Y295 367 aaKnown RBP2.85□□□□□ -1.95
PDGFC-208ENST00000512711 A6NNZ2 444 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 E5RJQ4 531 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 H7C4K7 107 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 KCNAB3O43448 404 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 MT-CO3P00414 261 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 PRKCBP05771 671 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 DLDP09622 509 aaKnown RBP2.84□□□□□ -1.95
PDGFC-208ENST00000512711 MYCLP12524 364 aaPredicted RBP2.84□□□□□ -1.95
PDGFC-208ENST00000512711 APEHP13798 732 aaKnown RBP2.84□□□□□ -1.95
PDGFC-208ENST00000512711 HGFP14210 728 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 HSPA6P17066 643 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 EN2P19622 333 aaPredicted RBP2.84□□□□□ -1.95
PDGFC-208ENST00000512711 IBSPP21815 317 aaPredicted RBP2.84□□□□□ -1.95
PDGFC-208ENST00000512711 SLC7A1P30825 629 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 DIO1P49895 249 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 BCAT1P54687 386 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 LINC00205P59089 165 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 DEUP1Q05D60 604 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 MAPK7Q13164 816 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 FHL1Q13642 323 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 GTF2H3Q13889 308 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 CCNIQ14094 377 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 ZNF260Q3ZCT1 412 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 C3orf38Q5JPI3 329 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 MTHFD1LQ6UB35 978 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 KIAA0319LQ8IZA0 1049 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 METTL25Q8N6Q8 603 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 NANOGP1Q8N7R0 232 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 ZNF398Q8TD17 642 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 PNISRQ8TF01 805 aaKnown RBP2.84□□□□□ -1.95
PDGFC-208ENST00000512711 IGFBPL1Q8WX77 278 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 RSPRY1Q96DX4 576 aa2.84□□□□□ -1.95
PDGFC-208ENST00000512711 WDYHV1Q96HA8 205 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms