RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 CEP295NLQ96MC4 621 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 ELOVL4Q9GZR5 314 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 APOBEC3GQ9HC16 384 aaKnown RBP12.79□□□□□ -0.36
CDK7-208ENST00000512687 THG1LQ9NWX6 298 aaKnown RBP12.79□□□□□ -0.36
CDK7-208ENST00000512687 WNT6Q9Y6F9 365 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 GPR179Q6PRD1 2367 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 IKBKBO14920 756 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 LILRB5O75023 590 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 BEST1O76090 585 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 KIF20AO95235 890 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 USP17L7P0C7H9 530 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 CCDC130P13994 396 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 GCLMP48507 274 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 NDST1P52848 882 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 NUCB2P80303 420 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 DMWDQ09019 674 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 IFRD2Q12894 506 aaPredicted RBP12.78□□□□□ -0.36
CDK7-208ENST00000512687 SGSM1Q2NKQ1 1148 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 FSTL4Q6MZW2 842 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 PKN3Q6P5Z2 889 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 FUKQ8N0W3 1084 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 ZMIZ2Q8NF64 920 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 TAS1R2Q8TE23 839 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 SH3RF2Q8TEC5 729 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 TWNKQ96RR1 684 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 KCNK16Q96T55 309 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 IER2Q9BTL4 223 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 RNF38Q9H0F5 515 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 SEMA4AQ9H3S1 761 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 MMRN2Q9H8L6 949 aa12.78□□□□□ -0.36
CDK7-208ENST00000512687 ZNF840PA6NDX5 716 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 TNFRSF10BO14763 440 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 KINO60870 393 aaKnown RBP12.77□□□□□ -0.37
CDK7-208ENST00000512687 OLFM2O95897 454 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 OAS1P00973 400 aaKnown RBP12.77□□□□□ -0.37
CDK7-208ENST00000512687 TCF3P15923 654 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 HDCP19113 662 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 PRCPP42785 496 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 PMS1P54277 932 aaKnown RBP12.77□□□□□ -0.37
CDK7-208ENST00000512687 MCCD1P59942 119 aaPredicted RBP12.77□□□□□ -0.37
CDK7-208ENST00000512687 TAF10Q12962 218 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 ADAM9Q13443 819 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 CAMK2BQ13554 666 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 LRRC32Q14392 662 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 EML3Q32P44 896 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 EDRF1Q3B7T1 1238 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 C1orf228Q6PIY5 440 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 MAMSTRQ6ZN01 415 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 INTS8Q75QN2 995 aaKnown RBP12.77□□□□□ -0.37
CDK7-208ENST00000512687 C12orf29Q8N999 325 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 SCAMP5Q8TAC9 235 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 SPATA20Q8TB22 786 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 OSCP1Q8WVF1 389 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 TAF4BQ92750 862 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 SMOQ99835 787 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 MED10Q9BTT4 135 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 FBRSL1Q9HCM7 1045 aaKnown RBP12.77□□□□□ -0.37
CDK7-208ENST00000512687 KRT82Q9NSB4 513 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 FAM49BQ9NUQ9 324 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 ZSCAN32Q9NX65 697 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 TRPM5Q9NZQ8 1165 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 ARHGAP26Q9UNA1 814 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 PCDHGA2Q9Y5H1 932 aa12.77□□□□□ -0.37
CDK7-208ENST00000512687 TRIM49BA6NDI0 452 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 K7ESF4 209 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 LEFTY2O00292 366 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 KRT13P13646 458 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 P4HA1P13674 534 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 GJA4P35212 333 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 PSMC2P35998 433 aaKnown RBP12.76□□□□□ -0.37
CDK7-208ENST00000512687 PGFP49763 221 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 CCR3P51677 355 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 SLC5A3P53794 718 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 INCA1Q0VD86 236 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 PDGFRLQ15198 375 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 COBLL1Q53SF7 1204 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 TMEM196Q5HYL7 178 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 DGKKQ5KSL6 1271 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 ZNF658Q5TYW1 1059 aaPredicted RBP12.76□□□□□ -0.37
CDK7-208ENST00000512687 CC2D1AQ6P1N0 951 aaPredicted RBP12.76□□□□□ -0.37
CDK7-208ENST00000512687 ZC3H3Q8IXZ2 948 aaKnown RBP12.76□□□□□ -0.37
CDK7-208ENST00000512687 NUP93Q8N1F7 819 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 SPEM1Q8N4L4 309 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 DCLK2Q8N568 766 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 SLC2A14Q8TDB8 520 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 WHAMMQ8TF30 809 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 EZH1Q92800 747 aaPredicted RBP12.76□□□□□ -0.37
CDK7-208ENST00000512687 SEMA4DQ92854 862 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 SMARCD1Q96GM5 515 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 TNIP3Q96KP6 325 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 LINC00597Q9H2U6 94 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 ECT2Q9H8V3 914 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 TMEM8AQ9HCN3 771 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 DUS2Q9NX74 493 aaKnown RBP12.76□□□□□ -0.37
CDK7-208ENST00000512687 PCDHA5Q9Y5H7 936 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 ATP8B3O60423 1300 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 CEP192Q8TEP8 1941 aa12.76□□□□□ -0.37
CDK7-208ENST00000512687 TRDMT1O14717 391 aaKnown RBP12.75□□□□□ -0.37
CDK7-208ENST00000512687 SCAMP3O14828 347 aaKnown RBP12.75□□□□□ -0.37
CDK7-208ENST00000512687 AP1G2O75843 785 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms