RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TMEM174Q8WUU8 243 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 EZH1Q92800 747 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-216ENST00000512683 SYAP1Q96A49 352 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-216ENST00000512683 PNKPQ96T60 521 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 CGRRF1Q99675 332 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 MMP17Q9ULZ9 603 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 PCDHA7Q9UN72 937 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 OBSL1O75147 1896 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 TICRRQ7Z2Z1 1910 aa13.39□□□□□ -0.27
VEGFA-216ENST00000512683 NUP210Q8TEM1 1887 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-216ENST00000512683 PVALEFA0A1B0GWK0 134 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 ADH1CP00326 375 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 OAS1P00973 400 aaKnown RBP13.38□□□□□ -0.27
VEGFA-216ENST00000512683 YWHAQP27348 245 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 HOXC13P31276 330 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 GRIA2P42262 883 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 TNNC1P63316 161 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 CREB5Q02930 508 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 TRPC3Q13507 836 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 DHCR24Q15392 516 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 CRY1Q16526 586 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 WDR72Q3MJ13 1102 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 FAM26FQ5R3K3 315 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 PMS2CLQ68D20 193 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 LMBRD2Q68DH5 695 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-216ENST00000512683 NUP93Q8N1F7 819 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 OR6B3Q8NGW1 331 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 OLIG1Q8TAK6 271 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 GOLGA5Q8TBA6 731 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 FAM84AQ96KN4 292 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 RNF38Q9H0F5 515 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 AGPAT3Q9NRZ7 376 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 IL37Q9NZH6 218 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 CHD8Q9HCK8 2581 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 ATP8B3O60423 1300 aa13.38□□□□□ -0.27
VEGFA-216ENST00000512683 F8VP50 259 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
VEGFA-216ENST00000512683 TGFB1I1O43294 461 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 APODP05090 189 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 DLATP10515 647 aaKnown RBP13.37□□□□□ -0.27
VEGFA-216ENST00000512683 CSRP1P21291 193 aaKnown RBP13.37□□□□□ -0.27
VEGFA-216ENST00000512683 CASP1P29466 404 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 GBP1P32455 592 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 ME1P48163 572 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 TUBP50607 506 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 USP46P62068 366 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 PSMC1P62191 440 aaKnown RBP13.37□□□□□ -0.27
VEGFA-216ENST00000512683 ZXDBP98169 803 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 DNM1Q05193 864 aaKnown RBP13.37□□□□□ -0.27
VEGFA-216ENST00000512683 CYP24A1Q07973 514 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 EHHADHQ08426 723 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 TAF10Q12962 218 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 BMT2Q1RMZ1 405 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 EOGTQ5NDL2 527 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 RESP18Q5W5W9 173 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 ATL3Q6DD88 541 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 RHBDF2Q6PJF5 856 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 UNC13DQ70J99 1090 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 TRMT11Q7Z4G4 463 aaKnown RBP13.37□□□□□ -0.27
VEGFA-216ENST00000512683 FILIP1Q7Z7B0 1213 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 TNIP3Q96KP6 325 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 POLMQ9NP87 494 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-216ENST00000512683 RXFP3Q9NSD7 469 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 EVLQ9UI08 416 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-216ENST00000512683 RCOR1Q9UKL0 485 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 CPQQ9Y646 472 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 ZNF638Q14966 1978 aaKnown RBP13.37□□□□□ -0.27
VEGFA-216ENST00000512683 GREB1Q4ZG55 1949 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 PTPRJQ12913 1337 aa13.37□□□□□ -0.27
VEGFA-216ENST00000512683 KIF26AQ9ULI4 1882 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-216ENST00000512683 A8MXQ7 604 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 TNFRSF10BO14763 440 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 HCRTO43612 131 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 KRT37O76014 449 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 KAT7O95251 611 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 CYP17A1P05093 508 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 CEACAM1P13688 526 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 HOXD12P35452 270 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 ASIC1P78348 528 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 CLDN10P78369 228 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 GAD2Q05329 585 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 LMAN2Q12907 356 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 GAB4Q2WGN9 574 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 C2orf27AQ580R0 203 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 MDH1BQ5I0G3 518 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 HECTD3Q5T447 861 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 BTBD8Q5XKL5 378 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 NAIF1Q69YI7 327 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-216ENST00000512683 RDH13Q8NBN7 331 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 B3GALNT2Q8NCR0 500 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 MRPL45Q9BRJ2 306 aaKnown RBP13.36□□□□□ -0.27
VEGFA-216ENST00000512683 EDEM2Q9BV94 578 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 ZDHHC9Q9Y397 364 aa13.36□□□□□ -0.27
VEGFA-216ENST00000512683 PTPRDP23468 1912 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 FAM92AA1XBS5 289 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 DCLK1O15075 740 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 PHACTR2O75167 634 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 ABL1P00519 1130 aa13.35□□□□□ -0.27
VEGFA-216ENST00000512683 RPN1P04843 607 aaKnown RBP13.35□□□□□ -0.27
VEGFA-216ENST00000512683 P4HA1P13674 534 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms