RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 ATP1A3P13637 1013 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 PAX3P23760 479 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 ATICP31939 592 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 BMPR1AP36894 532 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 COPB1P53618 953 aaKnown RBP10.1□□□□□ -0.79
SNF8-211ENST00000512243 ELAVL2Q12926 359 aaKnown RBP10.1□□□□□ -0.79
SNF8-211ENST00000512243 ZNF699Q32M78 642 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 VWA3BQ502W6 1294 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 EPC2Q52LR7 807 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 FUT10Q6P4F1 479 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 C3orf58Q8NDZ4 430 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 FBXL13Q8NEE6 735 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 IGSF21Q96ID5 467 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 C11orf84Q9BUA3 381 aaPredicted RBP10.1□□□□□ -0.79
SNF8-211ENST00000512243 VPS16Q9H269 839 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 KCNF1Q9H3M0 494 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 NDST4Q9H3R1 872 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 NPHS2Q9NP85 383 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 GCNT4Q9P109 453 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 STK39Q9UEW8 545 aa10.1□□□□□ -0.79
SNF8-211ENST00000512243 LIMA1Q9UHB6 759 aaKnown RBP10.1□□□□□ -0.79
SNF8-211ENST00000512243 LGALS16A8MUM7 142 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 C5orf67F2Z3F1 127 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 F8W810 466 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 PMM2O15305 246 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 TRAPPC3O43617 180 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 CPNE3O75131 537 aaKnown RBP10.09□□□□□ -0.79
SNF8-211ENST00000512243 FGF18O76093 207 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 VNN1O95497 513 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 SERPINC1P01008 464 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 ODC1P11926 461 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 P4HA1P13674 534 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 MYL6P60660 151 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 TNNC1P63316 161 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 NOP14P78316 857 aaKnown RBP10.09□□□□□ -0.79
SNF8-211ENST00000512243 KRT17Q04695 432 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 PCDH1Q08174 1060 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 FILIP1LQ4L180 1135 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 MIIPQ5JXC2 388 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 FKBP15Q5T1M5 1219 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 DSTYKQ6XUX3 929 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 C15orf39Q6ZRI6 1047 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 SPRED2Q7Z698 418 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 TMEM173Q86WV6 379 aaPredicted RBP10.09□□□□□ -0.79
SNF8-211ENST00000512243 FAM20CQ8IXL6 584 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 CXorf38Q8TB03 319 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 TAS1R2Q8TE23 839 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 BCL7CQ8WUZ0 217 aaPredicted RBP10.09□□□□□ -0.79
SNF8-211ENST00000512243 ARNTL2Q8WYA1 636 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 HPDLQ96IR7 371 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 HERC2P3Q9BVR0 1158 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 NIF3L1Q9GZT8 377 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 SOX17Q9H6I2 414 aaPredicted RBP10.09□□□□□ -0.79
SNF8-211ENST00000512243 CERS4Q9HA82 394 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 RAB20Q9NX57 234 aa10.09□□□□□ -0.79
SNF8-211ENST00000512243 GTPBP10A4D1E9 387 aaKnown RBP10.08□□□□□ -0.8
SNF8-211ENST00000512243 ASS1P00966 412 aaKnown RBP10.08□□□□□ -0.8
SNF8-211ENST00000512243 ITGB1P05556 798 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 SSTR4P31391 388 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 BRCC3P46736 316 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 AARSP49588 968 aaKnown RBP eCLIP10.08□□□□□ -0.8
SNF8-211ENST00000512243 LILRA4P59901 499 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 FANCCQ00597 558 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 PLCB3Q01970 1234 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 UBE3AQ05086 875 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 PDE4CQ08493 712 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 GPM6BQ13491 265 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 BMS1Q14692 1282 aaKnown RBP10.08□□□□□ -0.8
SNF8-211ENST00000512243 EXOC3L4Q17RC7 722 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 SGSM1Q2NKQ1 1148 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 ZNF667Q5HYK9 610 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 SCARA5Q6ZMJ2 495 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.08□□□□□ -0.8
SNF8-211ENST00000512243 GBP6Q6ZN66 633 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 DDX53Q86TM3 631 aaKnown RBP10.08□□□□□ -0.8
SNF8-211ENST00000512243 GDPD5Q8WTR4 605 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 TAF4BQ92750 862 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 SENP8Q96LD8 212 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 INTS2Q9H0H0 1204 aaKnown RBP10.08□□□□□ -0.8
SNF8-211ENST00000512243 CLEC4MQ9H2X3 399 aaPredicted RBP10.08□□□□□ -0.8
SNF8-211ENST00000512243 ZNF576Q9H609 170 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 PUF60Q9UHX1 559 aaKnown RBP10.08□□□□□ -0.8
SNF8-211ENST00000512243 LZTS1Q9Y250 596 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 COQ4Q9Y3A0 265 aa10.08□□□□□ -0.8
SNF8-211ENST00000512243 KPNA7A9QM74 516 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 H3BNC9 293 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 I3L4J1 428 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 CYB561D2O14569 222 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 SYN3O14994 580 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 HUS1O60921 280 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 CST3P01034 146 aaPredicted RBP10.07□□□□□ -0.8
SNF8-211ENST00000512243 SOD2P04179 222 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 URODP06132 367 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 TPM3P06753 285 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 CA8P35219 290 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 UBXN1Q04323 297 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 ZNF423Q2M1K9 1284 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 USP41Q3LFD5 358 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 TIGD5Q53EQ6 642 aa10.07□□□□□ -0.8
SNF8-211ENST00000512243 FAM171A1Q5VUB5 890 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms