RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 SEMA4AQ9H3S1 761 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 XPNPEP1Q9NQW7 623 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 CCDC78A2IDD5 438 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 TXNDC9O14530 226 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 POLBP06746 335 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 SNRPAP09012 282 aaKnown RBP13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 NNMTP40261 264 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 SERPINB9P50453 376 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 SEC24CP53992 1094 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 VCPP55072 806 aaKnown RBP13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 SESN3P58005 492 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 PTK7Q13308 1070 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 MORF4L2Q15014 288 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 LRRC6Q86X45 466 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 DCLK3Q9C098 648 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 CDC42EP4Q9H3Q1 356 aaKnown RBP13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 CNTNAP1P78357 1384 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 E5RJQ4 531 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 ACAP1Q15027 740 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 TRIM67Q6ZTA4 783 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 ANKRD23Q86SG2 305 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 ARHGAP18Q8N392 663 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 STKLD1Q8NE28 680 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 SEPT8Q92599 483 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 KLF6Q99612 283 aaPredicted RBP13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 FAM96AQ9H5X1 160 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 ZNF536O15090 1300 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 HOXA2O43364 376 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 CYP1A2P05177 515 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 MIPP30301 263 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 ARL2P36404 184 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 AMPD2Q01433 879 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 MAMLD1Q13495 774 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 UGP2Q16851 508 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 MUM1Q2TAK8 710 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 DENND1BQ6P3S1 775 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 DAW1Q8N136 415 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 WRAP73Q9P2S5 460 aaPredicted RBP13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 RBAK-RBAKDNI3L0D1 243 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 YWHAHQ04917 246 aaPredicted RBP13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 ADIGQ0VDE8 80 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 PTGISQ16647 500 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 UNC93AQ86WB7 457 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 MIB1Q86YT6 1006 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 KANSL3Q9P2N6 904 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 RBPJLQ9UBG7 517 aa13.63□□□□□ -0.23
PCDHA4-202ENST00000512229 ZC3H4Q9UPT8 1303 aaKnown RBP13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 C2CD2LO14523 706 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 KITP10721 976 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 RFC1P35251 1148 aaPredicted RBP13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 ALDH1A3P47895 512 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 RAD51Q06609 339 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 MAP7Q14244 749 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 CTXN3Q4LDR2 81 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 SH3D19Q5HYK7 790 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 IL31Q6EBC2 164 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 APBA2Q99767 749 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 ADAM2Q99965 735 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 PCDH9Q9HC56 1237 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 CCDC195A0A1B0GUA6 201 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 DHX15O43143 795 aaKnown RBP13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 ATP5HO75947 161 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 ALDH2P05091 517 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 ATN1P54259 1190 aaPredicted RBP13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 NOMO3P69849 1222 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 NAPEPLDQ6IQ20 393 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 PPHLN1Q8NEY8 458 aaKnown RBP13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 STAMBPL1Q96FJ0 436 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 SENP8Q96LD8 212 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 PIDD1Q9HB75 910 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 TRPC7Q9HCX4 862 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 HMX1Q9NP08 348 aaPredicted RBP13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 SIGLEC16A6NMB1 481 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 TTC4O95801 387 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 FDFT1P37268 417 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 GEMIN4P57678 1058 aaKnown RBP13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 SLC6A3Q01959 620 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 DBN1Q16643 649 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 ACCSLQ4AC99 568 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 RNF135Q8IUD6 432 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 CCDC33Q8N5R6 958 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 IPMKQ8NFU5 416 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 ZNF473Q8WTR7 871 aaKnown RBP13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 ZFP69BQ9UJL9 534 aa13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 LSM7Q9UK45 103 aaKnown RBP13.62□□□□□ -0.23
PCDHA4-202ENST00000512229 NCANO14594 1321 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 DPYSL4O14531 572 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 OPLAHO14841 1288 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 NOVP48745 357 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 HARS2P49590 506 aaKnown RBP13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 DRP2Q13474 957 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 BIRC2Q13490 618 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 ERMARDQ5T6L9 678 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 SPATA21Q7Z572 469 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 KATNAL2Q8IYT4 538 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 MDM1Q8TC05 714 aa13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 ZNF669Q96BR6 464 aaPredicted RBP13.61□□□□□ -0.23
PCDHA4-202ENST00000512229 ASIC4Q96FT7 647 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms