RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 ZNF71Q9NQZ8 489 aaPredicted RBP6.89□□□□□ -1.31
CLDND1-225ENST00000512147 CALCOCO1Q9P1Z2 691 aa6.89□□□□□ -1.31
CLDND1-225ENST00000512147 CYP8B1Q9UNU6 501 aa6.89□□□□□ -1.31
CLDND1-225ENST00000512147 INSL5Q9Y5Q6 135 aa6.89□□□□□ -1.31
CLDND1-225ENST00000512147 IGKV6D-21A0A0A0MT36 114 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 ARL5CA6NH57 179 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 PP2D1A8MPX8 630 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 K7EQS6 105 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 KCNK3O14649 394 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 CHMP2AO43633 222 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 DFNA5O60443 496 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 RTN2O75298 545 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 SIX3O95343 332 aaPredicted RBP6.88□□□□□ -1.31
CLDND1-225ENST00000512147 ITGA4P13612 1032 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 CDC25AP30304 524 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 SFNP31947 248 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 CSTF2P33240 577 aaKnown RBP eCLIP6.88□□□□□ -1.31
CLDND1-225ENST00000512147 CSNK1EP49674 416 aaKnown RBP6.88□□□□□ -1.31
CLDND1-225ENST00000512147 GPC3P51654 580 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 HDAC4P56524 1084 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 CYP4A11Q02928 519 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 ELAVL2Q12926 359 aaKnown RBP6.88□□□□□ -1.31
CLDND1-225ENST00000512147 EPHA7Q15375 998 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 ARHGAP15Q53QZ3 475 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 STXBP5Q5T5C0 1151 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 NCAPH2Q6IBW4 605 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 EFCAB12Q6NXP0 572 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 GDF7Q7Z4P5 450 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 SMAP1Q8IYB5 467 aaPredicted RBP6.88□□□□□ -1.31
CLDND1-225ENST00000512147 TCEAL8Q8IYN2 117 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 CPA6Q8N4T0 437 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 C9orf43Q8TAL5 461 aaPredicted RBP6.88□□□□□ -1.31
CLDND1-225ENST00000512147 SPATA32Q96LK8 384 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 DEPDC7Q96QD5 511 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 HSD17B14Q9BPX1 270 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 MMTAG2Q9BU76 263 aaKnown RBP6.88□□□□□ -1.31
CLDND1-225ENST00000512147 TMUB1Q9BVT8 246 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 INO80BQ9C086 356 aaPredicted RBP6.88□□□□□ -1.31
CLDND1-225ENST00000512147 DISC1Q9NRI5 854 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 CEP72Q9P209 647 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 MTRRQ9UBK8 725 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 LRWD1Q9UFC0 647 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 PCDHA7Q9UN72 937 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 PCDHA10Q9Y5I2 948 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 SNX11Q9Y5W9 270 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 CSMD2Q7Z408 3487 aa6.88□□□□□ -1.31
CLDND1-225ENST00000512147 ZBTB42B2RXF5 422 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 BACH1O14867 736 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 CUTAO60888 179 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 SLITRK3O94933 977 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 PRAMEF12O95522 483 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 PSAPP07602 524 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 SPATA31C1P0DKV0 1188 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 ARSAP15289 507 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 ATF2P15336 505 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 CKMT2P17540 419 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 ATP4AP20648 1035 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 LONP1P36776 959 aaKnown RBP6.87□□□□□ -1.31
CLDND1-225ENST00000512147 MLH1P40692 756 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 ME1P48163 572 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 SCNN1GP51170 649 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 AFF3P51826 1226 aaKnown RBP6.87□□□□□ -1.31
CLDND1-225ENST00000512147 JAK3P52333 1124 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 POLE2P56282 527 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 IL9RQ01113 521 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 KLRB1Q12918 225 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 HSP90AA2PQ14568 343 aaPredicted RBP6.87□□□□□ -1.31
CLDND1-225ENST00000512147 PDGFRLQ15198 375 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 TEAD4Q15561 434 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 SKOR2Q2VWA4 1001 aaPredicted RBP6.87□□□□□ -1.31
CLDND1-225ENST00000512147 GPR158Q5T848 1215 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 FAM160B1Q5W0V3 765 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 EGFLAMQ63HQ2 1017 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 SWSAP1Q6NVH7 229 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 MIS18BP1Q6P0N0 1132 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 BORAQ6PGQ7 559 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 RSRC2Q7L4I2 434 aaKnown RBP6.87□□□□□ -1.31
CLDND1-225ENST00000512147 MIER3Q7Z3K6 550 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 CCDC60Q8IWA6 550 aaPredicted RBP6.87□□□□□ -1.31
CLDND1-225ENST00000512147 CKAP2LQ8IYA6 745 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 IL17RCQ8NAC3 791 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 ZNF579Q8NAF0 562 aaKnown RBP6.87□□□□□ -1.31
CLDND1-225ENST00000512147 GLIS1Q8NBF1 620 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 CNNM3Q8NE01 707 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 RDM1Q8NG50 284 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 PRR7Q8TB68 274 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 HASPINQ8TF76 798 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 HPS3Q969F9 1004 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 DYDC2Q96IM9 177 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 EPSTI1Q96J88 318 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 EIF2AK1Q9BQI3 630 aaKnown RBP6.87□□□□□ -1.31
CLDND1-225ENST00000512147 FUCA2Q9BTY2 467 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 RGL1Q9NZL6 768 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 TCEAL9Q9UHQ7 104 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 SAMM50Q9Y512 469 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 BACE2Q9Y5Z0 518 aa6.87□□□□□ -1.31
CLDND1-225ENST00000512147 H0Y8X5 98 aa6.86□□□□□ -1.31
CLDND1-225ENST00000512147 PAPSS1O43252 624 aaPredicted RBP6.86□□□□□ -1.31
CLDND1-225ENST00000512147 MED24O75448 989 aa6.86□□□□□ -1.31
CLDND1-225ENST00000512147 ABLIM3O94929 683 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms