RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 IFIT3O14879 490 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 NVLO15381 856 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 GPAA1O43292 621 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 SYNCRIPO60506 623 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 FKBP9O95302 570 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CFBP00751 764 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 SRGAP2CP0DJJ0 459 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CYP2D6P10635 497 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 ALOX15P16050 662 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CTSSP25774 331 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 PTGS2P35354 604 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 MNAT1P51948 309 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CSNK2BP67870 215 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 BASP1P80723 227 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 KRT17Q04695 432 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 BTG3Q14201 252 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 ERCC6LQ2NKX8 1250 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 HSP90AA5PQ58FG0 334 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 XKR9Q5GH70 373 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 MDH1BQ5I0G3 518 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZSCAN25Q6NSZ9 544 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CYP4F22Q6NT55 531 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 WDR93Q6P2C0 686 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZCCHC12Q6PEW1 402 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 SLC2A7Q6PXP3 512 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 DENND5BQ6ZUT9 1274 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 FKBP9P1Q75LS8 142 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 HID1Q8IV36 788 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CD302Q8IX05 232 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 GALNT15Q8N3T1 639 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CRACR2BQ8N4Y2 399 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZNF321PQ8N8H1 164 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 ARRDC4Q8NCT1 418 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CDC26Q8NHZ8 85 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 KIF18AQ8NI77 898 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CREB3L4Q8TEY5 395 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 TMEM40Q8WWA1 233 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 PIBF1Q8WXW3 757 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 RFFLQ8WZ73 363 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZKSCAN4Q969J2 545 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 PPP1R14BQ96C90 147 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 C18orf8Q96DM3 657 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 TMEM41AQ96HV5 264 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 ATP6V0BQ99437 205 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 PAIP1Q9H074 479 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 NDST4Q9H3R1 872 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CNTD2Q9H8S5 307 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 GBA2Q9HCG7 927 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 C11orf16Q9NQ32 467 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 TUBA8Q9NY65 449 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 HDAC6Q9UBN7 1215 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 EXTL2Q9UBQ6 330 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 CROTQ9UKG9 612 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 PCDHB11Q9Y5F2 797 aa5.29□□□□□ -1.56
TRAPPC11-208ENST00000511955 PASKQ96RG2 1323 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 PITPNM2Q9BZ72 1349 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 EME2A4GXA9 379 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 FAM86C2PA6NEL3 165 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 TAF4O00268 1085 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 YKT6O15498 198 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 PRODHO43272 600 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 SPOPO43791 374 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ACSL4O60488 711 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 MGEA5O60502 916 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 BCAS2O75934 225 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 F12P00748 615 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 AFPP02771 609 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 SLC10A3P09131 477 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 PCSK2P16519 638 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 TFE3P19532 575 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 CHMP24386 653 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ACAT1P24752 427 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 EVI2BP34910 448 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 LONP1P36776 959 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 MAGEA9P43362 315 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 MAGEA10P43363 369 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZNF165P49910 485 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 EFTUD2Q15029 972 aaKnown RBP eCLIP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 BMP2KLQ5H9B9 411 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ATAT1Q5SQI0 421 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 KLHDC7AQ5VTJ3 777 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 LRIG3Q6UXM1 1119 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 DBX2Q6ZNG2 339 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 DHX32Q7L7V1 743 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 R3HCC1LQ7Z5L2 792 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 GPR149Q86SP6 731 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZNF589Q86UQ0 364 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 RETREG3Q86VR2 466 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 FAM151AQ8WW52 585 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ANKS1AQ92625 1134 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 VPS33AQ96AX1 596 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 TEPSINQ96N21 525 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 KCNC2Q96PR1 638 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 WRNIP1Q96S55 665 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 LLPHQ9BRT6 129 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 CRNKL1Q9BZJ0 848 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 GORASP2Q9H8Y8 452 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 PSTPIP2Q9H939 334 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 WDR6Q9NNW5 1121 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms